RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PPP1R8Q12972 351 aaKnown RBP18.87■□□□□ 0.61
CLIP3-206ENST00000593074 SGCGQ13326 291 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 FGL2Q14314 439 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 RFX4Q33E94 735 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 OR2T5Q6IEZ7 315 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 IKBIPQ70UQ0 350 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 THAP5Q7Z6K1 395 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 C17orf64Q86WR6 236 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 C8orf59Q8N0T1 100 aaPredicted RBP18.87■□□□□ 0.61
CLIP3-206ENST00000593074 C2orf73Q8N5S3 287 aaPredicted RBP18.87■□□□□ 0.61
CLIP3-206ENST00000593074 OR4K1Q8NGD4 311 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 OR2T29Q8NH02 315 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 PPCDCQ96CD2 204 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 WASH6PQ9NQA3 447 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 SPATA7Q9P0W8 599 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 TAC3Q9UHF0 121 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 OR1A2Q9Y585 309 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 U3KQV3 271 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 FABP3P05413 133 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 KLK1P06870 262 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 SLC35G4P0C7Q5 338 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 MVDP53602 400 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 CRYBA2P53672 197 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 TAS2R50P59544 299 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 RPS21P63220 83 aaKnown RBP18.86■□□□□ 0.61
CLIP3-206ENST00000593074 MC1RQ01726 317 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 KCNAB2Q13303 367 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 HTR4Q13639 388 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 MPEG1Q2M385 716 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 ZC3H12BQ5HYM0 836 aaKnown RBP18.86■□□□□ 0.61
CLIP3-206ENST00000593074 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.86■□□□□ 0.61
CLIP3-206ENST00000593074 ANKRD34AQ69YU3 496 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 VTCN1Q7Z7D3 282 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 ARL10Q8N8L6 244 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 TP53I13Q8NBR0 393 aaPredicted RBP18.86■□□□□ 0.61
CLIP3-206ENST00000593074 ZNF555Q8NEP9 628 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 KLK6Q92876 244 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 HSH2DQ96JZ2 352 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 MKRN2Q9H000 416 aaKnown RBP18.86■□□□□ 0.61
CLIP3-206ENST00000593074 RHBGQ9H310 441 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 TRIT1Q9H3H1 467 aaKnown RBP18.86■□□□□ 0.61
CLIP3-206ENST00000593074 DDX18Q9NVP1 670 aaKnown RBP18.86■□□□□ 0.61
CLIP3-206ENST00000593074 CFAP20Q9Y6A4 193 aaKnown RBP18.86■□□□□ 0.61
CLIP3-206ENST00000593074 GPR37L1O60883 481 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 DNTTP04053 509 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 PRKACGP22612 351 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 SLC5A2P31639 672 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 ESRRGP62508 458 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 VLDLRP98155 873 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 C2orf80Q0P641 193 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 TMEM196Q5HYL7 178 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 GPR141Q7Z602 305 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 SLC9B2Q86UD5 537 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 DCP2Q8IU60 420 aaKnown RBP18.86■□□□□ 0.61
CLIP3-206ENST00000593074 ABHD11Q8NFV4 315 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 MPP4Q96JB8 637 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 GABRG3Q99928 467 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 ACAT2Q9BWD1 397 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 NPLQ9BXD5 320 aaPredicted RBP18.86■□□□□ 0.61
CLIP3-206ENST00000593074 C1QTNF2Q9BXJ5 285 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 PCBD2Q9H0N5 130 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 ING2Q9H160 280 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 PHPT1Q9NRX4 125 aaPredicted RBP18.86■□□□□ 0.61
CLIP3-206ENST00000593074 GPATCH2Q9NW75 528 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 ACSL5Q9ULC5 683 aa18.86■□□□□ 0.61
CLIP3-206ENST00000593074 HS6ST1O60243 411 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 SEMA3DO95025 777 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 TBX6O95947 436 aaPredicted RBP18.85■□□□□ 0.61
CLIP3-206ENST00000593074 ELK4P28324 431 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 TEAD4Q15561 434 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 ZBED5Q49AG3 693 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 LPCAT2Q7L5N7 544 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 PIWIL3Q7Z3Z3 882 aaKnown RBP18.85■□□□□ 0.61
CLIP3-206ENST00000593074 OR14C36Q8NHC7 312 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 NRTNQ99748 197 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 PRR23AA6NEV1 266 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 ANHXE9PGG2 379 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 C6orf47O95873 294 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 NTRK1P04629 796 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 RAD23AP54725 363 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 RBM48Q5RL73 367 aaKnown RBP18.85■□□□□ 0.61
CLIP3-206ENST00000593074 IER5LQ5T953 404 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 TMEM26Q6ZUK4 368 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 NAGSQ8N159 534 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 C11orf65Q8NCR3 313 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 SMPDL3AQ92484 453 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 CIDECQ96AQ7 238 aaPredicted RBP18.85■□□□□ 0.61
CLIP3-206ENST00000593074 FAM131CQ96AQ9 280 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 AIF1LQ9BQI0 150 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 ASPSCR1Q9BZE9 553 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 FBRSQ9HAH7 460 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 FAF1Q9UNN5 650 aaPredicted RBP18.85■□□□□ 0.61
CLIP3-206ENST00000593074 PCDHGA8Q9Y5G5 932 aa18.85■□□□□ 0.61
CLIP3-206ENST00000593074 A0A1W2PPV9 198 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 PLRG1O43660 514 aaKnown RBP18.84■□□□□ 0.61
CLIP3-206ENST00000593074 DPM1O60762 260 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 IL3P08700 152 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 TPP2P29144 1249 aaPredicted RBP18.84■□□□□ 0.61
CLIP3-206ENST00000593074 CTHP32929 405 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 LTBRP36941 435 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms