RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ZNF860A6NHJ4 632 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 SMIM23A6NLE4 172 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 IDSB3KWA1 339 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 SLC28A2O43868 658 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 SERPINA6P08185 405 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 TAC1P20366 129 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 GSTM2P28161 218 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 XCR1P46094 333 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 PIK3CGP48736 1102 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 ALDH18A1P54886 795 aaKnown RBP9.54□□□□□ -0.88
BRCA1-227ENST00000591849 BTN3A2P78410 334 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 ACTN3Q08043 901 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-227ENST00000591849 AIMP2Q13155 320 aaKnown RBP9.54□□□□□ -0.88
BRCA1-227ENST00000591849 PRSS41Q7RTY9 318 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 LAPTM4BQ86VI4 370 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 PLD6Q8N2A8 252 aaKnown RBP9.54□□□□□ -0.88
BRCA1-227ENST00000591849 GALNT16Q8N428 558 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 PTGR2Q8N8N7 351 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-227ENST00000591849 AMER3Q8N944 861 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 UTP15Q8TED0 518 aaKnown RBP9.54□□□□□ -0.88
BRCA1-227ENST00000591849 PHF21BQ96EK2 531 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 PEX11GQ96HA9 241 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 MRPL57Q9BQC6 102 aaKnown RBP9.54□□□□□ -0.88
BRCA1-227ENST00000591849 TGIF2Q9GZN2 237 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 ACTR8Q9H981 624 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 COPS7BQ9H9Q2 264 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-227ENST00000591849 ZNF358Q9NW07 568 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 C19orf25Q9UFG5 118 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-227ENST00000591849 TBK1Q9UHD2 729 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 PCM1Q15154 2024 aa9.54□□□□□ -0.88
BRCA1-227ENST00000591849 NSG1A0A0A6YYJ2 146 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 SOCS6O14544 535 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 PCDH17O14917 1159 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 ERI3O43414 337 aaKnown RBP9.53□□□□□ -0.88
BRCA1-227ENST00000591849 CHST10O43529 356 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 GALR3O60755 368 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-227ENST00000591849 DPM1O60762 260 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 ALOX12BO75342 701 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 JRKO75564 520 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 CLEC3AO75596 197 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 BMP10O95393 424 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 KRT15P19012 456 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 NR1D1P20393 614 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 IL10P22301 178 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 JAK1P23458 1154 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 TNFRSF8P28908 595 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 EEF1DP29692 281 aaKnown RBP9.53□□□□□ -0.88
BRCA1-227ENST00000591849 PLA2G16P53816 162 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 OLR1P78380 273 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 PHEXP78562 749 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 EEF1A2Q05639 463 aaKnown RBP9.53□□□□□ -0.88
BRCA1-227ENST00000591849 IFFO1Q0D2I5 559 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 KLRB1Q12918 225 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 GTF2H2Q13888 395 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 SETDB1Q15047 1291 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 TECRLQ5HYJ1 363 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 GTF2H2CQ6P1K8 395 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 MED27Q6P2C8 311 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 KIRREL2Q6UWL6 708 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 ATG14Q6ZNE5 492 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 TIFABQ6ZNK6 161 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 NDUFAF7Q7L592 441 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 ZC3H7AQ8IWR0 971 aaKnown RBP9.53□□□□□ -0.88
BRCA1-227ENST00000591849 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.53□□□□□ -0.88
BRCA1-227ENST00000591849 ANKRD53Q8N9V6 530 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 ARMC2Q8NEN0 867 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 FDCSPQ8NFU4 85 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 PPP4R1Q8TF05 950 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 UBTD2Q8WUN7 234 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 C8orf44Q96CB5 159 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 REPS1Q96D71 796 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 SEC16BQ96JE7 1060 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 GPR78Q96P69 363 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 CENPKQ9BS16 269 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 RBCK1Q9BYM8 510 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 TXLNGYQ9BZA5 131 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 MRPL46Q9H2W6 279 aaKnown RBP9.53□□□□□ -0.88
BRCA1-227ENST00000591849 KLHL31Q9H511 634 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 PPCSQ9HAB8 311 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 CLK4Q9HAZ1 481 aaKnown RBP9.53□□□□□ -0.88
BRCA1-227ENST00000591849 ZNF160Q9HCG1 818 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 XPR1Q9UBH6 696 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 FETUBQ9UGM5 382 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 ANAPC2Q9UJX6 822 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 PCDHGB7Q9Y5F8 929 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 PCDHGA9Q9Y5G4 932 aaKnown RBP9.53□□□□□ -0.88
BRCA1-227ENST00000591849 HS3ST3B1Q9Y662 390 aa9.53□□□□□ -0.88
BRCA1-227ENST00000591849 SNRNP200O75643 2136 aaKnown RBP9.53□□□□□ -0.88
BRCA1-227ENST00000591849 A0A0G2JN53 185 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 TLDC2A0PJX2 215 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 GOLGA8RI6L899 631 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 MASP2O00187 686 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 B3GALT2O43825 422 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 B4GALT2O60909 372 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 CDC123O75794 336 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 WFS1O76024 890 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 ZIC2O95409 532 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-227ENST00000591849 B3GALT4O96024 378 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 HPP00738 406 aa9.52□□□□□ -0.89
BRCA1-227ENST00000591849 C8orf89P0DMQ9 161 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms