RNA–Protein interactions for RNA: ENST00000591461.1

PKN1-213, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-213	ENST00000591461	CHST10	O43529	356 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	KLK8	O60259	260 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	GALR3	O60755	368 aa	Predicted RBP	13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	IPO13	O94829	963 aa	Known RBP	13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	SMIM10L1	P0DMW3	83 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	PYGB	P11216	843 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	PCNA	P12004	261 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	ALOX12	P18054	663 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	AHR	P35869	848 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	HSD17B3	P37058	310 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	XCR1	P46094	333 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	PLA2G16	P53816	162 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	C19orf57	Q0VDD7	668 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	PWP1	Q13610	501 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	MINDY4	Q4G0A6	757 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	KLC3	Q6P597	504 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	TIFAB	Q6ZNK6	161 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	GOLGA7	Q7Z5G4	137 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	OR11G2	Q8NGC1	345 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	MVB12A	Q96EY5	273 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	PTCD3	Q96EY7	689 aa	Known RBP	13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	SMIM10	Q96HG1	83 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	SLC25A23	Q9BV35	468 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	MFRP	Q9BY79	579 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	TRIM4	Q9C037	500 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	VN1R1	Q9GZP7	353 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	ZNF160	Q9HCG1	818 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	PRM3	Q9NNZ6	103 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	LUZP4	Q9P127	313 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	SLC22A7	Q9Y694	548 aa		13.84	□□□□□ -0.19
PKN1-213	ENST00000591461	MYOCOS	A0A1B0GUC4	107 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	SYCE1L	A8MT33	242 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461		H0YIG0	161 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	MKRN2OS	H3BPM6	223 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	AGPS	O00116	658 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	RTCA	O00442	366 aa	Known RBP	13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	WFS1	O76024	890 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	TGFB1	P01137	390 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	CNTF	P26441	200 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	ST13	P50502	369 aa	Known RBP	13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	ALDH18A1	P54886	795 aa	Known RBP	13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	RGS1	Q08116	209 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	DDX39B	Q13838	428 aa	Known RBP	13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	GTF2H2	Q13888	395 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	RUNX2	Q13950	521 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	LACTB2	Q53H82	288 aa	Predicted RBP	13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	GTF2H2C	Q6P1K8	395 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	ASB18	Q6ZVZ8	466 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	MED25	Q71SY5	747 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	PRICKLE2	Q7Z3G6	844 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	UBE3D	Q7Z6J8	389 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	MYLK4	Q86YV6	388 aa	Predicted RBP	13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	KRT78	Q8N1N4	520 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	TBC1D19	Q8N5T2	526 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	EIF1AD	Q8N9N8	165 aa	Known RBP	13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	TRPV3	Q8NET8	790 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	TSLP	Q969D9	159 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	MTFMT	Q96DP5	389 aa	Known RBP	13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	MS4A6E	Q96DS6	147 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	WDR34	Q96EX3	536 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	SORBS1	Q9BX66	1292 aa	Known RBP	13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	ADNP	Q9H2P0	1102 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	NOL11	Q9H8H0	719 aa	Known RBP	13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	SEMA3G	Q9NS98	782 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	RNF11	Q9Y3C5	154 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	ANGPTL3	Q9Y5C1	460 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	PCM1	Q15154	2024 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	CFAP46	Q8IYW2	2715 aa		13.83	□□□□□ -0.2
PKN1-213	ENST00000591461	SPEN	Q96T58	3664 aa	Known RBP	13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	TLDC2	A0PJX2	215 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	LRIT2	A6NDA9	550 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461		B8ZZF3	427 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	E2F3	O00716	465 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	OR7A17	O14581	309 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	ERI3	O43414	337 aa	Known RBP	13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	B4GALT2	O60909	372 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	SERPINA6	P08185	405 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	CD63	P08962	238 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	RBP1	P09455	135 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	EPB42	P16452	691 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	CD97	P48960	835 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	NEK2	P51955	445 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	CDH13	P55290	713 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	BTG2	P78543	158 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	HERC3	Q15034	1050 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	NADK2	Q4G0N4	442 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	CCDC91	Q7Z6B0	441 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	GALNT16	Q8N428	558 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	OR52B6	Q8NGF0	335 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	AEN	Q8WTP8	325 aa	Known RBP	13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	PARD6B	Q9BYG5	372 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	FAM117A	Q9C073	453 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	TGIF2	Q9GZN2	237 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	IPPK	Q9H8X2	491 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	ZBTB26	Q9HCK0	441 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	LANCL2	Q9NS86	450 aa		13.82	□□□□□ -0.2
PKN1-213	ENST00000591461	NXT1	Q9UKK6	140 aa	Known RBP	13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms