RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 EFNA3P52797 238 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 SOX8P57073 446 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 MEF2AQ02078 507 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-211ENST00000590499 OCA2Q04671 838 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 KLC1Q07866 573 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 CSHL1Q14406 222 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 VWA2Q5GFL6 755 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 NXPE4Q6UWF7 544 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 KIRREL2Q6UWL6 708 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 C20orf204Q6ZNR8 217 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 SHISA6Q6ZSJ9 500 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 ASB18Q6ZVZ8 466 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 FRA10AC1Q70Z53 315 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 PRSS41Q7RTY9 318 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 ISCA2Q86U28 154 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 PDSS2Q86YH6 399 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 ZC3H7AQ8IWR0 971 aaKnown RBP10.62□□□□□ -0.71
SMAD4-211ENST00000590499 SHISA5Q8N114 240 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 AFAP1L2Q8N4X5 818 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 CEP112Q8N8E3 955 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 KCT2Q8NC54 265 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 PDPRQ8NCN5 879 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 FDCSPQ8NFU4 85 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 IFT81Q8WYA0 676 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 MIEF2Q96C03 454 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 MMABQ96EY8 250 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-211ENST00000590499 FER1L6-AS2Q96M78 137 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 TSNARE1Q96NA8 513 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 CYTH2Q99418 400 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 EGFL8Q99944 293 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 MESP1Q9BRJ9 268 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 NUDT9Q9BW91 350 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 TSPYL1Q9H0U9 437 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 MKKSQ9NPJ1 570 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-211ENST00000590499 SEMA3GQ9NS98 782 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 IGSF5Q9NSI5 407 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 ANAPC2Q9UJX6 822 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 FBXL4Q9UKA2 621 aa10.62□□□□□ -0.71
SMAD4-211ENST00000590499 HEMK1Q9Y5R4 338 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-211ENST00000590499 A0A1W2PQ72 361 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 H0YIG0 161 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 MASP2O00187 686 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 PEX12O00623 359 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 PRAMEF4O60810 478 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 ACSL3O95573 720 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 IGHEP01854 428 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 SLC35G6P0C7Q6 338 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 EPB42P16452 691 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 PHBP35232 272 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 AHRP35869 848 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 CASRP41180 1078 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 GDF5P43026 501 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 IDH3AP50213 366 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 PGDP52209 483 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 MAT1AQ00266 395 aaKnown RBP10.61□□□□□ -0.71
SMAD4-211ENST00000590499 KLRB1Q12918 225 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 PWP1Q13610 501 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 BMPR2Q13873 1038 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 NDUFA9Q16795 377 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 SYT16Q17RD7 645 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 MROH9Q5TGP6 573 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 PRAMEF9Q5VWM5 478 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 ATG14Q6ZNE5 492 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 TMPRSS11BQ86T26 416 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 GPSM1Q86YR5 675 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 CENPLQ8N0S6 344 aaPredicted RBP10.61□□□□□ -0.71
SMAD4-211ENST00000590499 TCAIMQ8N3R3 496 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 ANKRD53Q8N9V6 530 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 LRRN4CLQ8ND94 238 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 OR11G2Q8NGC1 345 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 OR9A4Q8NGU2 314 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 SLC44A1Q8WWI5 657 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 SLC13A3Q8WWT9 602 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 ISL2Q96A47 359 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 MOCOSQ96EN8 888 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 ATOH8Q96SQ7 321 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 SMAD5Q99717 465 aaKnown RBP10.61□□□□□ -0.71
SMAD4-211ENST00000590499 CRB3Q9BUF7 120 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 SNX15Q9NRS6 342 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 C14orf105Q9NVL8 296 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 COPG2Q9UBF2 871 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 TRPC4Q9UBN4 977 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 ZFP69BQ9UJL9 534 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 C3orf18Q9UK00 162 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 PTBP2Q9UKA9 531 aaKnown RBP10.61□□□□□ -0.71
SMAD4-211ENST00000590499 PCDHGB7Q9Y5F8 929 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 SLC22A7Q9Y694 548 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 KCNE2Q9Y6J6 123 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 SCN2AQ99250 2005 aa10.61□□□□□ -0.71
SMAD4-211ENST00000590499 NCF1BA6NI72 391 aaPredicted RBP10.6□□□□□ -0.71
SMAD4-211ENST00000590499 NCF1CA8MVU1 366 aaPredicted RBP10.6□□□□□ -0.71
SMAD4-211ENST00000590499 IDSB3KWA1 339 aa10.6□□□□□ -0.71
SMAD4-211ENST00000590499 NDUFS4O43181 175 aa10.6□□□□□ -0.71
SMAD4-211ENST00000590499 OR1F1O43749 312 aa10.6□□□□□ -0.71
SMAD4-211ENST00000590499 KERAO60938 352 aa10.6□□□□□ -0.71
SMAD4-211ENST00000590499 IPO13O94829 963 aaKnown RBP10.6□□□□□ -0.71
SMAD4-211ENST00000590499 WDR47O94967 919 aa10.6□□□□□ -0.71
SMAD4-211ENST00000590499 BMP10O95393 424 aa10.6□□□□□ -0.71
SMAD4-211ENST00000590499 ALDOAP04075 364 aaKnown RBP10.6□□□□□ -0.71
SMAD4-211ENST00000590499 C2P06681 752 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms