RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 CHMP2BQ9UQN3 213 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 DYRK1BQ9Y463 629 aa16.87■□□□□ 0.29
PRKCSH-211ENST00000590098 URADA6NGE7 173 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 FAM227AF5H4B4 570 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 NDC80O14777 642 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 B4GALT2O60909 372 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 ZNF888P0CJ79 500 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 PRF1P14222 555 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 TCP1P17987 556 aaKnown RBP16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 AHRP35869 848 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 SCTRP47872 440 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 ST13P50502 369 aaKnown RBP16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 PGGT1BP53609 377 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 SLC26A5P58743 744 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 OLR1P78380 273 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 SPINK14Q6IE38 97 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 RPTNQ6XPR3 784 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 MRGPRGQ86SM5 289 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 CYP4X1Q8N118 509 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 FAM98AQ8NCA5 519 aaKnown RBP16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 MDS2Q8NDY4 140 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 ITLN2Q8WWU7 325 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 CCDC120Q96HB5 630 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 PDLIM5Q96HC4 596 aaKnown RBP16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 TSNARE1Q96NA8 513 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 NPAS2Q99743 824 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 OLFM1Q99784 485 aa16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 KLF2Q9Y5W3 355 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-211ENST00000590098 GABRR3A8MPY1 467 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 PRMT3O60678 531 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 SLC19A2O60779 497 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 ESRRAP11474 423 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 SAT1P21673 171 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 IVDP26440 423 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 TNFRSF8P28908 595 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 ALDH6A1Q02252 535 aaKnown RBP16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 KRTCAP3Q53RY4 240 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 TRMT10BQ6PF06 316 aaKnown RBP16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 SYDE1Q6ZW31 735 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 THOC6Q86W42 341 aaKnown RBP16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 LGI4Q8N135 537 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 ZNF808Q8N4W9 903 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 TRPV3Q8NET8 790 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 LRRC39Q96DD0 335 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 SCMH1Q96GD3 660 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 MAGED4Q96JG8 741 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 PWWP2AQ96N64 755 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 PTCHD1Q96NR3 888 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 AIF1LQ9BQI0 150 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 HES7Q9BYE0 225 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 CDCP1Q9H5V8 836 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 PELI2Q9HAT8 420 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 CLK4Q9HAZ1 481 aaKnown RBP16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 PLAC1Q9HBJ0 212 aa16.85■□□□□ 0.29
PRKCSH-211ENST00000590098 GTF3C1Q12789 2109 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 CSMD1Q96PZ7 3565 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 PSMD12O00232 456 aaPredicted RBP16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 CDK2AP1O14519 115 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 MAN1A2O60476 641 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 DNAJB6O75190 326 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 B3GALT4O96024 378 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 HNF4AP41235 474 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 RAB8AP61006 207 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 REEP5Q00765 189 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 RBBP5Q15291 538 aaKnown RBP16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 STEAP4Q687X5 459 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 SBSNQ6UWP8 590 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 RPS19BP1Q86WX3 136 aaKnown RBP16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 KLHL7Q8IXQ5 586 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 NKAPQ8N5F7 415 aaKnown RBP16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 ELP5Q8TE02 316 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 UTP15Q8TED0 518 aaKnown RBP16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 THAP3Q8WTV1 239 aaPredicted RBP16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 RUNDC3BQ96NL0 473 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 UNKQ9C0B0 810 aaKnown RBP16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 SPNS1Q9H2V7 528 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 TRMT1Q9NXH9 659 aaKnown RBP16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 ZFATQ9P243 1243 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 LRFN1Q9P244 771 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 TEX264Q9Y6I9 313 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 KCNE2Q9Y6J6 123 aa16.84■□□□□ 0.29
PRKCSH-211ENST00000590098 SP1P08047 785 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 RNH1P13489 461 aaKnown RBP16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 ARL4CP56559 192 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 DR1Q01658 176 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 FRG1Q14331 258 aaKnown RBP16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 MAPKAPK3Q16644 382 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 SLC25A25Q6KCM7 469 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 NXPE4Q6UWF7 544 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 QSOX2Q6ZRP7 698 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 GALNTL5Q7Z4T8 443 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 TMPRSS11BQ86T26 416 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 MCEMP1Q8IX19 187 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 ARMC2Q8NEN0 867 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 CAPZA3Q96KX2 299 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 GPR137Q96N19 417 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 EGFL8Q99944 293 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 SLC6A16Q9GZN6 736 aa16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 TSPAN10Q9H1Z9 355 aaPredicted RBP16.83■□□□□ 0.28
PRKCSH-211ENST00000590098 RHBGQ9H310 441 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms