RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 CPSF6Q16630 551 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMAD4-210ENST00000590061 NDUFA9Q16795 377 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 DPY19L1Q2PZI1 675 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 DEFB133Q30KQ1 61 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 GARNL3Q5VVW2 1013 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 NXNQ6DKJ4 435 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 MBOAT1Q6ZNC8 495 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 DBX2Q6ZNG2 339 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 ADCK2Q7Z695 626 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 TMPRSS11BQ86T26 416 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 SYVN1Q86TM6 617 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 LRRC56Q8IYG6 542 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-210ENST00000590061 ADGRF3Q8IZF5 1079 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 LSMEM2Q8N112 164 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 SLC25A45Q8N413 288 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 MINDY1Q8N5J2 469 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 ZNF781Q8N8C0 355 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 GLB1L3Q8NCI6 653 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-210ENST00000590061 OR7G3Q8NG95 312 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 DNAJB8Q8NHS0 232 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 CCL4L1Q8NHW4 92 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 NAT14Q8WUY8 206 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 N4BP2L2Q92802 583 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-210ENST00000590061 USP7Q93009 1102 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 PYCR2Q96C36 320 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 MAELQ96JY0 434 aaKnown RBP7.02□□□□□ -1.29
SMAD4-210ENST00000590061 PSMG3-AS1Q96PY0 264 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 CCDC3Q9BQI4 270 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 MENTQ9BUN1 341 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 TCEAL2Q9H3H9 227 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-210ENST00000590061 ZBTB26Q9HCK0 441 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 PDE7BQ9NP56 450 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 SAR1AQ9NR31 198 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 C1orf109Q9NX04 203 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 SIRT5Q9NXA8 310 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 NDE1Q9NXR1 346 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 ASIC5Q9NY37 505 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 FTSJ1Q9UET6 329 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 TAC3Q9UHF0 121 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 ZDHHC2Q9UIJ5 367 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 ZFP69BQ9UJL9 534 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 DCTN4Q9UJW0 460 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 POMT2Q9UKY4 750 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 RUVBL1Q9Y265 456 aaKnown RBP7.02□□□□□ -1.29
SMAD4-210ENST00000590061 PLEKHM1Q9Y4G2 1056 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 PCYT1BQ9Y5K3 369 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-210ENST00000590061 DNAJC15Q9Y5T4 150 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 SPACA6W5XKT8 324 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 MUC6Q6W4X9 2439 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 HEATR5BQ9P2D3 2071 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 GPR179Q6PRD1 2367 aa7.02□□□□□ -1.29
SMAD4-210ENST00000590061 TNRC6BQ9UPQ9 1833 aaKnown RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 PTPRZ1P23471 2315 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 OTOGLQ3ZCN5 2332 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 BLACEA4D250 179 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 E7EQ34 232 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 PROB1E7EW31 1015 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 ITM2AO43736 263 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 OR1F1O43749 312 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 PRICKLE3O43900 615 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 OR4F21O95013 312 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 HBQ1P09105 142 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 THRAP10827 490 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 CDH1P12830 882 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 UGT2B7P16662 529 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 CDH3P22223 829 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 PRDX3P30048 256 aaKnown RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 MRPL19P49406 292 aaKnown RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 ACADVLP49748 655 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 CLNS1AP54105 237 aaKnown RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 TRA2BP62995 288 aaKnown RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 HSD11B2P80365 405 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 REEP5Q00765 189 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 ACSM2AQ08AH3 577 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 STX5Q13190 355 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 SLBPQ14493 270 aaKnown RBP eCLIP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 SQLEQ14534 574 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 RBBP5Q15291 538 aaKnown RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 FAM214AQ32MH5 1076 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 UGT3A2Q3SY77 523 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 EXOSC6Q5RKV6 272 aaKnown RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 FAM91A1Q658Y4 838 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 ACSM2BQ68CK6 577 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 LETMD1Q6P1Q0 360 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 FIGLAQ6QHK4 219 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 IKBIPQ70UQ0 350 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 ABHD13Q7L211 337 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 KANSL1Q7Z3B3 1105 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 PRSS42Q7Z5A4 293 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 R3HCC1LQ7Z5L2 792 aaKnown RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 FAM129CQ86XR2 697 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 SAMD14Q8IZD0 417 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 MIER2Q8N344 545 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 MFSD9Q8NBP5 474 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 VPS37AQ8NEZ2 397 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 OR52B6Q8NGF0 335 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 BAHD1Q8TBE0 780 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-210ENST00000590061 ADAMTS18Q8TE60 1221 aa7.01□□□□□ -1.29
SMAD4-210ENST00000590061 CCDC74AQ96AQ1 378 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms