RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 SH3BGRLO75368 114 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 DXOO77932 396 aaKnown RBP12.96□□□□□ -0.33
VMP1-210ENST00000589823 STK17BO94768 372 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 NTRK1P04629 796 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 ZNF888P0CJ79 500 aaPredicted RBP12.96□□□□□ -0.33
VMP1-210ENST00000589823 ZNF10P21506 573 aaPredicted RBP12.96□□□□□ -0.33
VMP1-210ENST00000589823 SLC5A2P31639 672 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 SKP1P63208 163 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 HYAL2Q12891 473 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 FAM53BQ14153 422 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 HERC3Q15034 1050 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 KIF26BQ2KJY2 2108 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 DEPDC1Q5TB30 811 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 KHDRBS2Q5VWX1 349 aaKnown RBP12.96□□□□□ -0.33
VMP1-210ENST00000589823 RHBDD2Q6NTF9 364 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 NIPAL1Q6NVV3 410 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 TRIM40Q6P9F5 258 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 SCIMPQ6UWF3 145 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 ATG14Q6ZNE5 492 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 RGS9BPQ6ZS82 235 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 DDIASQ8IXT1 998 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 TWIST2Q8WVJ9 160 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 GAL3ST3Q96A11 431 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 RNF31Q96EP0 1072 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 FAR2Q96K12 515 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 C10orf90Q96M02 699 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 F2RL3Q96RI0 385 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 OR51B5Q9H339 312 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 KLHL31Q9H511 634 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 ANKHQ9HCJ1 492 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 FOXJ2Q9P0K8 574 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 DHCR7Q9UBM7 475 aaKnown RBP12.96□□□□□ -0.33
VMP1-210ENST00000589823 HAO1Q9UJM8 370 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 PPT2Q9UMR5 302 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 CDC14AQ9UNH5 594 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 SLC12A4Q9UP95 1085 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 SLC22A7Q9Y694 548 aa12.96□□□□□ -0.33
VMP1-210ENST00000589823 KNTC1P50748 2209 aa12.96□□□□□ -0.34
VMP1-210ENST00000589823 MDC1Q14676 2089 aaKnown RBP12.95□□□□□ -0.34
VMP1-210ENST00000589823 A0A1B0GX78 115 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 SERTM1A2A2V5 107 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 CDRT15L2A8MXV6 281 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 SLC28A1O00337 649 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 ERI3O43414 337 aaKnown RBP12.95□□□□□ -0.34
VMP1-210ENST00000589823 BRINP1O60477 761 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 KLK3P07288 261 aaPredicted RBP12.95□□□□□ -0.34
VMP1-210ENST00000589823 ZNF28P17035 718 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 ALOX12P18054 663 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 CD82P27701 267 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 HNRNPH1P31943 449 aaKnown RBP12.95□□□□□ -0.34
VMP1-210ENST00000589823 MDH1P40925 334 aaKnown RBP12.95□□□□□ -0.34
VMP1-210ENST00000589823 GCGRP47871 477 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 AVPR1BP47901 424 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 PLA2G16P53816 162 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 RAB8AP61006 207 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 GUCY1A3Q02108 690 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 CUL3Q13618 768 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 ABRAXAS2Q15018 415 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 ADPRMQ3LIE5 342 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 C1orf189Q5VU69 101 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 FAM219BQ5XKK7 198 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 PRMT9Q6P2P2 845 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 RNF165Q6ZSG1 346 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 OR2L5Q8NG80 312 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 PROKR1Q8TCW9 393 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 UTP15Q8TED0 518 aaKnown RBP12.95□□□□□ -0.34
VMP1-210ENST00000589823 RGMAQ96B86 450 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 MS4A6EQ96DS6 147 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 MVB12AQ96EY5 273 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 C7orf26Q96N11 449 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 LRFN5Q96NI6 719 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 KCNC2Q96PR1 638 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 HBEGFQ99075 208 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 CCT7Q99832 543 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 COPS7BQ9H9Q2 264 aaPredicted RBP12.95□□□□□ -0.34
VMP1-210ENST00000589823 ASCL3Q9NQ33 180 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 PNPOQ9NVS9 261 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 AHSPQ9NZD4 102 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 VPS29Q9UBQ0 182 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 ANGPTL2Q9UKU9 493 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 DNAJC15Q9Y5T4 150 aa12.95□□□□□ -0.34
VMP1-210ENST00000589823 A0A0A6YYC8 382 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 TCP11X1B4DZS4 312 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 SLCO1B7G3V0H7 640 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 STMND1H3BQB6 276 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 I3L1I5 382 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 SAP18O00422 153 aaKnown RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 PIP5K1BO14986 540 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 RGS14O43566 566 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 SKAP2O75563 359 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 SEMA3DO95025 777 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 NSA2O95478 260 aaKnown RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 DLGAP3O95886 979 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 TBX6O95947 436 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 CCNYL3P0C7X3 344 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 KITP10721 976 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 PIM1P11309 404 aaPredicted RBP12.94□□□□□ -0.34
VMP1-210ENST00000589823 IL1RNP18510 177 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 AGXTP21549 392 aa12.94□□□□□ -0.34
VMP1-210ENST00000589823 SSR2P43308 183 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms