RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 MTERF4Q7Z6M4 381 aaKnown RBP14.45□□□□□ -0.1
ATG4D-211ENST00000589753 LRRC34Q8IZ02 419 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 ZCCHC10Q8TBK6 192 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 GAL3ST3Q96A11 431 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 MS4A6EQ96DS6 147 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 C19orf60Q96EN9 201 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 ZNF317Q96PQ6 595 aaPredicted RBP14.45□□□□□ -0.1
ATG4D-211ENST00000589753 ZPBPQ9BS86 351 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 NDC1Q9BTX1 674 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 DDA1Q9BW61 102 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 NUF2Q9BZD4 464 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 ASPSCR1Q9BZE9 553 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 SLC7A5P2Q9GIP4 190 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 AICDAQ9GZX7 198 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 KLHL31Q9H511 634 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 POLR1BQ9H9Y6 1135 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 FGFR1OP2Q9NVK5 253 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 VPS29Q9UBQ0 182 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 SRPK3Q9UPE1 567 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 PCDHGA8Q9Y5G5 932 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 CEP250Q9BV73 2442 aa14.45□□□□□ -0.1
ATG4D-211ENST00000589753 TRPC5OSA6NMA1 111 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 SAP18O00422 153 aaKnown RBP14.44□□□□□ -0.1
ATG4D-211ENST00000589753 ERI3O43414 337 aaKnown RBP14.44□□□□□ -0.1
ATG4D-211ENST00000589753 TIAF1O95411 115 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 ZNF888P0CJ79 500 aaPredicted RBP14.44□□□□□ -0.1
ATG4D-211ENST00000589753 GCGRP47871 477 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 RAP1GDS1P52306 607 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 GABREP78334 506 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 TGM3Q08188 693 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 MUM1Q2TAK8 710 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 TUBB8Q3ZCM7 444 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 XKR7Q5GH72 579 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 TMEM164Q5U3C3 297 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 PRAMEF17Q5VTA0 474 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 TRIM40Q6P9F5 258 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 ARHGEF39Q8N4T4 335 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 SRFBP1Q8NEF9 429 aaKnown RBP14.44□□□□□ -0.1
ATG4D-211ENST00000589753 OR2L5Q8NG80 312 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 UTP15Q8TED0 518 aaKnown RBP14.44□□□□□ -0.1
ATG4D-211ENST00000589753 PMEPA1Q969W9 287 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 RGMAQ96B86 450 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 CHMP6Q96FZ7 201 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 PPP1R36Q96LQ0 422 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 C10orf90Q96M02 699 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 TEFMQ96QE5 360 aaKnown RBP14.44□□□□□ -0.1
ATG4D-211ENST00000589753 ACTR5Q9H9F9 607 aaPredicted RBP14.44□□□□□ -0.1
ATG4D-211ENST00000589753 CUTCQ9NTM9 273 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 RIC8BQ9NVN3 520 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 AHSPQ9NZD4 102 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 MRPS2Q9Y399 296 aaKnown RBP14.44□□□□□ -0.1
ATG4D-211ENST00000589753 PCDHB3Q9Y5E6 796 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 SLC22A7Q9Y694 548 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 USH1CQ9Y6N9 552 aa14.44□□□□□ -0.1
ATG4D-211ENST00000589753 RSL1D1O76021 490 aaKnown RBP14.43□□□□□ -0.1
ATG4D-211ENST00000589753 SEMA3DO95025 777 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 TNFSF15O95150 251 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 TGDSO95455 350 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 HBQ1P09105 142 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 SMIM10L1P0DMW3 83 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 ALOX12P18054 663 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 ARFIP1P53367 373 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 PLA2G16P53816 162 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 RAB8AP61006 207 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 FAM53BQ14153 422 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 HERC3Q15034 1050 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 NR6A1Q15406 480 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 SPDYAQ5MJ70 313 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 ABHD17CQ6PCB6 329 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 Q6ZSR9 355 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 TTLL10Q6ZVT0 673 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 OR2T11Q8NH01 316 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 SMIM10Q96HG1 83 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 C3orf30Q96M34 536 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 KCNC2Q96PR1 638 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 C17orf62Q9BQA9 187 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 MRPL1Q9BYD6 325 aaKnown RBP14.43□□□□□ -0.1
ATG4D-211ENST00000589753 MEAF6Q9HAF1 191 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 ANKHQ9HCJ1 492 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 ADAM21Q9UKJ8 722 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 CCL27Q9Y4X3 112 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 PCDHGA3Q9Y5H0 932 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 B3GALT1Q9Y5Z6 326 aa14.43□□□□□ -0.1
ATG4D-211ENST00000589753 PIEZO1Q92508 2521 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 A0A088AWK7 358 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 A0A0G2JN53 185 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 ATP6AP2A0A1C7CYW4 349 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 C9orf172C9J069 976 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 C4orf51C9J302 202 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 NPIPB8E9PQR5 432 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 RTCAO00442 366 aaKnown RBP14.42□□□□□ -0.1
ATG4D-211ENST00000589753 PLPP1O14494 284 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 ZNF195O14628 629 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 DSCR3O14972 297 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 CPNE3O75131 537 aaKnown RBP14.42□□□□□ -0.1
ATG4D-211ENST00000589753 ATP6AP2O75787 350 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 MED26O95402 600 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 NTRK1P04629 796 aa14.42□□□□□ -0.1
ATG4D-211ENST00000589753 TROVE2P10155 538 aaKnown RBP eCLIP14.42□□□□□ -0.1
ATG4D-211ENST00000589753 ALOX15P16050 662 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms