RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CBLL1Q75N03 491 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 CHST15Q7LFX5 561 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 OTOP2Q7RTS6 562 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 TECPR1Q7Z6L1 1165 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ZC3H7AQ8IWR0 971 aaKnown RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 NPAS3Q8IXF0 933 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 KIAA1958Q8N8K9 716 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 NAT16Q8N8M0 369 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 RASGEF1AQ8N9B8 481 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ATG16L2Q8NAA4 619 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 BPIFB6Q8NFQ5 453 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 OR7G3Q8NG95 312 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 CHTF18Q8WVB6 975 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 RORBQ92753 470 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 VOPP1Q96AW1 172 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 PPP1R16AQ96I34 528 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 LINC00597Q9H2U6 94 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 EHD1Q9H4M9 534 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 EPS8L2Q9H6S3 715 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 PALMDQ9NP74 551 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 KRT84Q9NSB2 600 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 HCFC1R1Q9NWW0 138 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 FZD4Q9ULV1 537 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 PCDHGB1Q9Y5G3 927 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 GMPPBQ9Y5P6 360 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 PIKFYVEQ9Y2I7 2098 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 SCN8AQ9UQD0 1980 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 KIAA1671Q9BY89 1806 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 C17orf113A0A1B0GUU1 675 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 A0A1W2PPW3 197 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 FADS2P1A8MWK0 482 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 SLC1A7O00341 560 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 KPNA3O00505 521 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ADAMDEC1O15204 470 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 B4GAT1O43505 415 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 B3GALT4O96024 378 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 C9P02748 559 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF12P17014 697 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 MMP12P39900 470 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 CCR2P41597 374 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 SERPINB10P48595 397 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 PRIM2P49643 509 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 C21orf59P57076 290 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 RBBP4Q09028 425 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF763Q0D2J5 394 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF77Q15935 545 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 FGD3Q5JSP0 725 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 KDM4DQ6B0I6 523 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 GALNT18Q6P9A2 607 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 TRIM40Q6P9F5 258 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 C16orf87Q6PH81 154 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 CRTC3Q6UUV7 619 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 LINC00299Q6ZSB3 139 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 PDZD3Q86UT5 571 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ZZZ3Q8IYH5 903 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 HS3ST5Q8IZT8 346 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 C1orf52Q8N6N3 182 aaKnown RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 TTC29Q8NA56 475 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 DRAXINQ8NBI3 349 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 HUS1BQ8NHY5 278 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 SETD7Q8WTS6 366 aaKnown RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 CYB5D2Q8WUJ1 264 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 COQ8BQ96D53 544 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF347Q96SE7 839 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 PKP4Q99569 1192 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 EPYCQ99645 322 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 LHPPQ9H008 270 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 RIBC2Q9H4K1 309 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 DYRK4Q9NR20 520 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 GALNT8Q9NY28 637 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 AHSPQ9NZD4 102 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 PDP1Q9P0J1 537 aaPredicted RBP7.12□□□□□ -1.27
ZNF540-206ENST00000589117 ENOPH1Q9UHY7 261 aa7.12□□□□□ -1.27
ZNF540-206ENST00000589117 GABRR3A8MPY1 467 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF99A8MXY4 864 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PI15O43692 258 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PCDH7O60245 1069 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 SCN2BO60939 215 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 C1GALT1C1LP0DN25 315 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 LAMP1P11279 417 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 IL7RP16871 459 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 NME2P22392 152 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 IMPA1P29218 277 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TIA1P31483 386 aaKnown RBP eCLIP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PIGAP37287 484 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PREPP48147 710 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PLA2G16P53816 162 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 MVKQ03426 396 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 BCL7AQ4VC05 210 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TM4SF20Q53R12 229 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.11□□□□□ -1.27
ZNF540-206ENST00000589117 KIAA1614Q5VZ46 1190 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 PLPP4Q5VZY2 271 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 XAF1Q6GPH4 301 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 ANGPTL8Q6UXH0 198 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF765Q7L2R6 523 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 TRAPPC5Q8IUR0 188 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 SLC30A8Q8IWU4 369 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 CFAP206Q8IYR0 622 aa7.11□□□□□ -1.27
ZNF540-206ENST00000589117 CPA6Q8N4T0 437 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms