RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 EHD1Q9H4M9 534 aa13.63□□□□□ -0.23
DDX39A-208ENST00000588692 PTGFRNQ9P2B2 879 aa13.63□□□□□ -0.23
DDX39A-208ENST00000588692 COPG2Q9UBF2 871 aa13.63□□□□□ -0.23
DDX39A-208ENST00000588692 CSAG2Q9Y5P2 127 aa13.63□□□□□ -0.23
DDX39A-208ENST00000588692 COPG1Q9Y678 874 aaKnown RBP13.63□□□□□ -0.23
DDX39A-208ENST00000588692 CNTRLQ7Z7A1 2325 aa13.63□□□□□ -0.23
DDX39A-208ENST00000588692 SCN2AQ99250 2005 aa13.63□□□□□ -0.23
DDX39A-208ENST00000588692 DYTNA2CJ06 578 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 ZNF860A6NHJ4 632 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 TCP11X1B4DZS4 312 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 S100BP04271 92 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-208ENST00000588692 FHP07954 510 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 GDF5P43026 501 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 OR4D1Q15615 310 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 PLAG1Q6DJT9 500 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 TMIGD1Q6UXZ0 262 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 LANCL3Q6ZV70 420 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 RAPH1Q70E73 1250 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 TBC1D1Q86TI0 1168 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-208ENST00000588692 MMGT1Q8N4V1 131 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 CISD2Q8N5K1 135 aaKnown RBP13.62□□□□□ -0.23
DDX39A-208ENST00000588692 PLPP5Q8NEB5 264 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 MNS1Q8NEH6 495 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 UTP15Q8TED0 518 aaKnown RBP13.62□□□□□ -0.23
DDX39A-208ENST00000588692 TBC1D20Q96BZ9 403 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 PEX11GQ96HA9 241 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 CNDP1Q96KN2 507 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 BARD1Q99728 777 aaKnown RBP13.62□□□□□ -0.23
DDX39A-208ENST00000588692 TMEM79Q9BSE2 394 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 RNF32Q9H0A6 362 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 TSPYL1Q9H0U9 437 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 NT5DC2Q9H857 520 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 AGPAT4Q9NRZ5 378 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 LANCL2Q9NS86 450 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 DNAJC11Q9NVH1 559 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 ASF1BQ9NVP2 202 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 CD274Q9NZQ7 290 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 MTRF1LQ9UGC7 380 aaKnown RBP13.62□□□□□ -0.23
DDX39A-208ENST00000588692 TEKT2Q9UIF3 430 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 RNF112Q9ULX5 631 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 USP9XQ93008 2570 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-208ENST00000588692 DOPEY2Q9Y3R5 2298 aa13.62□□□□□ -0.23
DDX39A-208ENST00000588692 MAGEB17A8MXT2 336 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 CLGNO14967 610 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 TAPBPO15533 448 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 STK16O75716 305 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 FAM155BO75949 473 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 SLC35E2BP0CK96 405 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 HPDP32754 393 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-208ENST00000588692 PHBP35232 272 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 GLRBP48167 497 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 STXBP1P61764 594 aaKnown RBP13.61□□□□□ -0.23
DDX39A-208ENST00000588692 ARG2P78540 354 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 RHAGQ02094 409 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 HYAL2Q12891 473 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 SLBPQ14493 270 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX39A-208ENST00000588692 ESPL1Q14674 2120 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 EXT1Q16394 746 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 PDK4Q16654 411 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 C18orf21Q32NC0 220 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-208ENST00000588692 FHL5Q5TD97 284 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 RPUSD3Q6P087 351 aaKnown RBP13.61□□□□□ -0.23
DDX39A-208ENST00000588692 ANKRD37Q7Z713 158 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 CMC1Q7Z7K0 106 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 RELL1Q8IUW5 271 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 SIRT6Q8N6T7 355 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 OR5T3Q8NGG3 340 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 STAG3L4Q8TBR4 150 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 CREB3L4Q8TEY5 395 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 C19orf60Q96EN9 201 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 EFCAB11Q9BUY7 163 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 NMRAL1Q9HBL8 299 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 NUDT4Q9NZJ9 180 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 COL12A1Q99715 3063 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 CCDC189A1A4V9 331 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 KIF2AO00139 706 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-208ENST00000588692 CHST10O43529 356 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 SEC24DO94855 1032 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-208ENST00000588692 CELA2AP08217 269 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 SMIM10L1P0DMW3 83 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 ITGAMP11215 1152 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 TFEBP19484 476 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 HSPA7P48741 367 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 SRSF1Q07955 248 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■□□□ 13.7
DDX39A-208ENST00000588692 ABRAXAS2Q15018 415 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 EFTUD2Q15029 972 aaKnown RBP eCLIP13.61□□□□□ -0.238e-7■■■■■ 29.6
DDX39A-208ENST00000588692 NSDHLQ15738 373 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 BTBD16Q32M84 506 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 TOR1AIP1Q5JTV8 583 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 LRRC70Q7Z2Q7 622 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX39A-208ENST00000588692 ZNF592Q92610 1267 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 HAS2Q92819 552 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 GAL3ST3Q96A11 431 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 WDR34Q96EX3 536 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 PTCD3Q96EY7 689 aaKnown RBP13.61□□□□□ -0.23
DDX39A-208ENST00000588692 SMIM10Q96HG1 83 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 LPAR4Q99677 370 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 RBCK1Q9BYM8 510 aa13.61□□□□□ -0.23
DDX39A-208ENST00000588692 PTBP2Q9UKA9 531 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms