RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ABCA12Q86UK0 2595 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 SLC16A5O15375 505 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 CHST10O43529 356 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 GALR3O60755 368 aaPredicted RBP12.87□□□□□ -0.35
HDAC5-208ENST00000588419 SLC25A12O75746 678 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 SP1P08047 785 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 NPPBP16860 134 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 ZNF24P17028 368 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 ALOX12P18054 663 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 MAOAP21397 527 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 SAT1P21673 171 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 TPP2P29144 1249 aaPredicted RBP12.87□□□□□ -0.35
HDAC5-208ENST00000588419 PTGER4P35408 488 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 IL2P60568 153 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 RAB8AP61006 207 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 SKP1P63208 163 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 HYAL2Q12891 473 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 CSHL1Q14406 222 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 ZNF630Q2M218 657 aaPredicted RBP12.87□□□□□ -0.35
HDAC5-208ENST00000588419 SPANXN3Q5MJ09 141 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 RNASEH2BQ5TBB1 312 aaKnown RBP12.87□□□□□ -0.35
HDAC5-208ENST00000588419 C3P1Q6ZMU1 363 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 ABHD13Q7L211 337 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 SPPL2CQ8IUH8 684 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 CPSF7Q8N684 471 aaKnown RBP12.87□□□□□ -0.35
HDAC5-208ENST00000588419 HORMAD2Q8N7B1 307 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 PLPP5Q8NEB5 264 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 SLC5A11Q8WWX8 675 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 CERS2Q96G23 380 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 SNF8Q96H20 258 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 PTCHD1Q96NR3 888 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 NEU2Q9Y3R4 380 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 DYRK1BQ9Y463 629 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 SLC22A7Q9Y694 548 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 LRBAP50851 2863 aa12.87□□□□□ -0.35
HDAC5-208ENST00000588419 TRBC2A0A5B9 178 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 C19orf84I3L1E1 186 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 PSMD12O00232 456 aaPredicted RBP12.86□□□□□ -0.35
HDAC5-208ENST00000588419 GABRB3P28472 473 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 RFC3P40938 356 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 BTG2P78543 158 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 RBBP5Q15291 538 aaKnown RBP12.86□□□□□ -0.35
HDAC5-208ENST00000588419 CYP1B1Q16678 543 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 TOR1AIP1Q5JTV8 583 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 HECTD2Q5U5R9 776 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 ZNF468Q5VIY5 522 aaPredicted RBP12.86□□□□□ -0.35
HDAC5-208ENST00000588419 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 SLC25A25Q6KCM7 469 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 XKRXQ6PP77 449 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 RPS19BP1Q86WX3 136 aaKnown RBP12.86□□□□□ -0.35
HDAC5-208ENST00000588419 THAP3Q8WTV1 239 aaPredicted RBP12.86□□□□□ -0.35
HDAC5-208ENST00000588419 NEIL2Q969S2 332 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 LURAP1Q96LR2 239 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 OR4K3Q96R72 315 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 FAM129AQ9BZQ8 928 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 CHMP2BQ9UQN3 213 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 JRKLQ9Y4A0 524 aa12.86□□□□□ -0.35
HDAC5-208ENST00000588419 A0A0G2JN53 185 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 NPEPPSL1A6NEC2 478 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 SAGE2PA6NJ88 616 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 DNALI1O14645 258 aaPredicted RBP12.85□□□□□ -0.35
HDAC5-208ENST00000588419 TFECO14948 347 aaPredicted RBP12.85□□□□□ -0.35
HDAC5-208ENST00000588419 CDC40O60508 579 aaKnown RBP eCLIP12.85□□□□□ -0.35
HDAC5-208ENST00000588419 PRMT3O60678 531 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 NEURL1O76050 574 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 CLDN14O95500 239 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 AHSGP02765 367 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 IL10P22301 178 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 FNTAP49354 379 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 ITGA8P53708 1063 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 PWP1Q13610 501 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 CDSNQ15517 529 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 MSS51Q4VC12 460 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 KRTCAP3Q53RY4 240 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 FAM45BPQ6NSW5 357 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 PCGF5Q86SE9 256 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 GHDCQ8N2G8 530 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 SLC35F6Q8N357 371 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 OR56A3Q8NH54 315 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 NT5CQ8TCD5 201 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 FAM45AQ8TCE6 357 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 AGAP11Q8TF27 550 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 SREK1Q8WXA9 508 aaKnown RBP12.85□□□□□ -0.35
HDAC5-208ENST00000588419 ATL1Q8WXF7 558 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 CCT6BQ92526 530 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 TMEM125Q96AQ2 219 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 FBXL8Q96CD0 374 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 MTFMTQ96DP5 389 aaKnown RBP12.85□□□□□ -0.35
HDAC5-208ENST00000588419 OSBPL9Q96SU4 736 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 OLFM1Q99784 485 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 EGFL8Q99944 293 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 DDX47Q9H0S4 455 aaKnown RBP12.85□□□□□ -0.35
HDAC5-208ENST00000588419 GPAMQ9HCL2 828 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 PRM3Q9NNZ6 103 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 ZFP69BQ9UJL9 534 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 IKZF3Q9UKT9 509 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 MEMO1Q9Y316 297 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 PCDHGB6Q9Y5F9 930 aa12.85□□□□□ -0.35
HDAC5-208ENST00000588419 HCFC1P51610 2035 aa12.84□□□□□ -0.35
HDAC5-208ENST00000588419 TRBV11-1A0A0K0K1C0 115 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms