RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 DYRK1BQ9Y463 629 aa13.49□□□□□ -0.25
VMP1-206ENST00000587945 A0A1B0GUH1 482 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 FAM95CA0A1B0GW59 222 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 MAGEB17A8MXT2 336 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 CRYABP02511 175 aaKnown RBP13.48□□□□□ -0.25
VMP1-206ENST00000587945 CD96P40200 585 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 BTG2P78543 158 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 FRG1Q14331 258 aaKnown RBP13.48□□□□□ -0.25
VMP1-206ENST00000587945 USP10Q14694 798 aaKnown RBP13.48□□□□□ -0.25
VMP1-206ENST00000587945 RBBP5Q15291 538 aaKnown RBP13.48□□□□□ -0.25
VMP1-206ENST00000587945 MEP1AQ16819 746 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 C18orf21Q32NC0 220 aaPredicted RBP13.48□□□□□ -0.25
VMP1-206ENST00000587945 SPINK14Q6IE38 97 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 NXPE4Q6UWF7 544 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 CAPN12Q6ZSI9 719 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 CYP4X1Q8N118 509 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 KIF2BQ8N4N8 673 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 TBC1D19Q8N5T2 526 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 DNAJB8Q8NHS0 232 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 NT5CQ8TCD5 201 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 UTP15Q8TED0 518 aaKnown RBP13.48□□□□□ -0.25
VMP1-206ENST00000587945 ANKRD49Q8WVL7 239 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 RELTQ969Z4 430 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 LPAR4Q99677 370 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 UNKQ9C0B0 810 aaKnown RBP13.48□□□□□ -0.25
VMP1-206ENST00000587945 RHBGQ9H310 441 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 MOCS1Q9NZB8 636 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 SEC14L3Q9UDX4 400 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 SH3BGRL2Q9UJC5 107 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 SNX24Q9Y343 169 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 SAR1BQ9Y6B6 198 aa13.48□□□□□ -0.25
VMP1-206ENST00000587945 TRGV8A0A0C4DH27 118 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 EFCAB8A8MWE9 144 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 C4orf51C9J302 202 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 FAM227AF5H4B4 570 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 MYBL2P10244 700 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 IL10P22301 178 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 AHRP35869 848 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 GDF5P43026 501 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 SLC26A5P58743 744 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 HYAL2Q12891 473 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 OR1C1Q15619 314 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 TSNQ15631 228 aaKnown RBP13.47□□□□□ -0.25
VMP1-206ENST00000587945 ABHD13Q7L211 337 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 CEP97Q8IW35 865 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 NKAPQ8N5F7 415 aaKnown RBP13.47□□□□□ -0.25
VMP1-206ENST00000587945 MDS2Q8NDY4 140 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 RUNDC3BQ96NL0 473 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 PTCHD1Q96NR3 888 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 KRT12Q99456 494 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 NAPGQ99747 312 aaPredicted RBP13.47□□□□□ -0.25
VMP1-206ENST00000587945 EGFL8Q99944 293 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 AIF1LQ9BQI0 150 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 UTP23Q9BRU9 249 aaKnown RBP13.47□□□□□ -0.25
VMP1-206ENST00000587945 AICDAQ9GZX7 198 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 CDCP1Q9H5V8 836 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 PELI2Q9HAT8 420 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 SMYD2Q9NRG4 433 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 SVILO95425 2214 aa13.47□□□□□ -0.25
VMP1-206ENST00000587945 CROCCQ5TZA2 2017 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 ARHGAP10A1A4S6 786 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 GABRR3A8MPY1 467 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 FANCGO15287 622 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 PRMT3O60678 531 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 MAOAP21397 527 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 RPL21P46778 160 aaKnown RBP13.46□□□□□ -0.25
VMP1-206ENST00000587945 OC90Q02509 493 aaPredicted RBP13.46□□□□□ -0.25
VMP1-206ENST00000587945 ZNF468Q5VIY5 522 aaPredicted RBP13.46□□□□□ -0.25
VMP1-206ENST00000587945 SPATA6LQ8N4H0 392 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 SLC5A8Q8N695 610 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 CREB3L4Q8TEY5 395 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 SLC6A16Q9GZN6 736 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 TSPAN10Q9H1Z9 355 aaPredicted RBP13.46□□□□□ -0.25
VMP1-206ENST00000587945 COPG2Q9UBF2 871 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 CTNNAL1Q9UBT7 734 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 PYCARDQ9ULZ3 195 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 OARD1Q9Y530 152 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 KCNE2Q9Y6J6 123 aa13.46□□□□□ -0.25
VMP1-206ENST00000587945 A0A0G2JN53 185 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 NCF1BA6NI72 391 aaPredicted RBP13.45□□□□□ -0.26
VMP1-206ENST00000587945 A8MUA0 341 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 NCF1CA8MVU1 366 aaPredicted RBP13.45□□□□□ -0.26
VMP1-206ENST00000587945 PRSS44E7EML9 344 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 E7ESA3 106 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 NDC80O14777 642 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 WDR47O94967 919 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 SMIM10L1P0DMW3 83 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 NCF1P14598 390 aaPredicted RBP13.45□□□□□ -0.26
VMP1-206ENST00000587945 JAK1P23458 1154 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 PAFAH1B1P43034 410 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 TAS2R50P59544 299 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 SKP1P63208 163 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 TOR1AIP1Q5JTV8 583 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 SP5Q6BEB4 398 aaPredicted RBP13.45□□□□□ -0.26
VMP1-206ENST00000587945 FRA10AC1Q70Z53 315 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.45□□□□□ -0.26
VMP1-206ENST00000587945 ZBED8Q8IZ13 594 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 TRPV3Q8NET8 790 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 ELP5Q8TE02 316 aa13.45□□□□□ -0.26
VMP1-206ENST00000587945 CCDC120Q96HB5 630 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms