RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 C18orf21Q32NC0 220 aaPredicted RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 RFX4Q33E94 735 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 PLA2G4EQ3MJ16 856 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 FAM174BQ3ZCQ3 159 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 SLC36A3Q495N2 470 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 SYTL3Q4VX76 610 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 USP39Q53GS9 565 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 C2orf27AQ580R0 203 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 RUNDC3AQ59EK9 446 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 HENMT1Q5T8I9 393 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 CDCP2Q5VXM1 449 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 TTC23Q5W5X9 447 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ERICH5Q6P6B1 374 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 IYDQ6PHW0 289 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 TTC33Q6PID6 262 aaPredicted RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 ABRAXAS1Q6UWZ7 409 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 LIPIQ6XZB0 460 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 USP30Q70CQ3 517 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ASCL5Q7RTU5 278 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 TECPR1Q7Z6L1 1165 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 PATL1Q86TB9 770 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 IFNEQ86WN2 208 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 MMAAQ8IVH4 418 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 MRPL41Q8IXM3 137 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 LIX1Q8N485 282 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 SPEM1Q8N4L4 309 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 VPS37AQ8NEZ2 397 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ADAMTS16Q8TE57 1224 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 SKA2Q8WVK7 121 aaPredicted RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 BTN2A2Q8WVV5 523 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ASB12Q8WXK4 309 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ELMO1Q92556 727 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 NELL1Q92832 810 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 GFM2Q969S9 779 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 TMEM159Q96B96 161 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ERLEC1Q96DZ1 483 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 FAM122AQ96E09 287 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 DTNBP1Q96EV8 351 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 AURKBQ96GD4 344 aaPredicted RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 FCRL1Q96LA6 429 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 PPM1MQ96MI6 270 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 RNF145Q96MT1 663 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ZNF583Q96ND8 569 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 OR52E6Q96RD3 313 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 PRPF18Q99633 342 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 SLC29A1Q99808 456 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 PRRX2Q99811 253 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 SH3GL3Q99963 347 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 CCM2Q9BSQ5 444 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ADI1Q9BV57 179 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 PIF1Q9H611 641 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 BRF2Q9HAW0 419 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 PCDH12Q9NPG4 1184 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 INTS7Q9NVH2 962 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 DDX18Q9NVP1 670 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 GPRC5BQ9NZH0 403 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 FBXO4Q9UKT5 387 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 CORO2BQ9UQ03 480 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 RUVBL1Q9Y265 456 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 INVSQ9Y283 1065 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 MSRB2Q9Y3D2 182 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ABCA7Q8IZY2 2146 aa5.54□□□□□ -1.52
SDF2-206ENST00000587788 ZNF106Q9H2Y7 1883 aaKnown RBP5.54□□□□□ -1.52
SDF2-206ENST00000587788 TRBV5-3A0A0A0MS03 114 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 A0A0U1RQS6 177 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 TRIM64A6NGJ6 449 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 SAC3D1A6NKF1 404 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 SLC22A31A6NKX4 558 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 A8MX80 341 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 CHURC1-FNTBB4DL54 471 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 C9JVG2 144 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 H0YIV9 168 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 FFAR3O14843 346 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 GPR42O15529 346 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 KCNJ13O60928 360 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 ADAM23O75077 832 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 PGM3O95394 542 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 PDYNP01213 254 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 CTSLP07711 333 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 ELFN1P0C7U0 828 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 ACADMP11310 421 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 MTHFD1P11586 935 aaKnown RBP5.53□□□□□ -1.52
SDF2-206ENST00000587788 ADRB3P13945 408 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 DDX5P17844 614 aaKnown RBP5.53□□□□□ -1.52
SDF2-206ENST00000587788 HRH2P25021 359 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 OXTRP30559 389 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 CA5AP35218 305 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 RPL3P39023 403 aaKnown RBP5.53□□□□□ -1.52
SDF2-206ENST00000587788 MMP12P39900 470 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 PEX19P40855 299 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 WASP42768 502 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 GDF5P43026 501 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 KIR3DL1P43629 444 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 ALDH3B2P48448 385 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 FNTBP49356 437 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 PRLHRP49683 370 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 ALDH3A2P51648 485 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 DGKEP52429 567 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 DGKQP52824 942 aa5.53□□□□□ -1.52
SDF2-206ENST00000587788 OR4D2P58180 307 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms