RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ALKBH8Q96BT7 664 aaKnown RBP13.19□□□□□ -0.3
DNMT1-213ENST00000587604 SERPINB12Q96P63 405 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 DMRTA2Q96SC8 542 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 HAUS8Q9BT25 410 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 ENKD1Q9H0I2 346 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 TRIM45Q9H8W5 580 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-213ENST00000587604 TRMT6Q9UJA5 497 aaKnown RBP13.19□□□□□ -0.3
DNMT1-213ENST00000587604 ASB1Q9Y576 335 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 ZNF407Q9C0G0 2248 aa13.19□□□□□ -0.3
DNMT1-213ENST00000587604 ADAM10O14672 748 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 ZNHIT1O43257 154 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 CHST10O43529 356 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 DNAJB6O75190 326 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 HIST1H2AGP0C0S8 130 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-213ENST00000587604 ZNF24P17028 368 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 ALOX12P18054 663 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 HIST1H2ADP20671 130 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 TPP2P29144 1249 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-213ENST00000587604 TRHRP34981 398 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-213ENST00000587604 CCR8P51685 355 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 MLF1P58340 268 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 HSF1Q00613 529 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 TIAL1Q01085 375 aaKnown RBP eCLIP13.18□□□□□ -0.3
DNMT1-213ENST00000587604 SP140Q13342 867 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 TESK1Q15569 626 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 HSP90AA5PQ58FG0 334 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 RNFT1Q5M7Z0 435 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 MBOAT1Q6ZNC8 495 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 ZNF662Q6ZS27 426 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 NCCRP1Q6ZVX7 275 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-213ENST00000587604 STRA8Q7Z7C7 330 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 ZNF227Q86WZ6 799 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 KIF2BQ8N4N8 673 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 CPSF7Q8N684 471 aaKnown RBP13.18□□□□□ -0.3
DNMT1-213ENST00000587604 ZNF740Q8NDX6 193 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 CA5BP1Q8WTZ4 195 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 HIST1H2AHQ96KK5 128 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 HIST1H2AJQ99878 128 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 H2AFJQ9BTM1 129 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 MCCC2Q9HCC0 563 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 MAD1L1Q9Y6D9 718 aa13.18□□□□□ -0.3
DNMT1-213ENST00000587604 GOLGA8MH3BSY2 632 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 NDUFS4O43181 175 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 OR1F1O43749 312 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 PRMT3O60678 531 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 B4GALT2O60909 372 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 CXCR5P32302 372 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 MAGEA3P43357 314 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 HLCSP50747 726 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 TLE4Q04727 773 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 DEFB134Q4QY38 66 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 PAQR3Q6TCH7 311 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 SPNS3Q6ZMD2 512 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 C3P1Q6ZMU1 363 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 QSOX2Q6ZRP7 698 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 FGD2Q7Z6J4 655 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 MYO1HQ8N1T3 1032 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 AGGF1Q8N302 714 aaeCLIP13.17□□□□□ -0.3
DNMT1-213ENST00000587604 POGLUT1Q8NBL1 392 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 TMEM125Q96AQ2 219 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 SDCCAG3Q96C92 435 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 SNF8Q96H20 258 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 SIGLEC10Q96LC7 697 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 PTCHD1Q96NR3 888 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 NDNQ99608 321 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 TREX2Q9BQ50 279 aaPredicted RBP13.17□□□□□ -0.3
DNMT1-213ENST00000587604 FAM167BQ9BTA0 163 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 CLK4Q9HAZ1 481 aaKnown RBP13.17□□□□□ -0.3
DNMT1-213ENST00000587604 LZTFL1Q9NQ48 299 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 IARS2Q9NSE4 1012 aaKnown RBP13.17□□□□□ -0.3
DNMT1-213ENST00000587604 TAS2R13Q9NYV9 303 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 COQ3Q9NZJ6 369 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 PPT2Q9UMR5 302 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 HCFC1P51610 2035 aa13.17□□□□□ -0.3
DNMT1-213ENST00000587604 TRBC2A0A5B9 178 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 ITGA8P53708 1063 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 OLR1P78380 273 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 BTG2P78543 158 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 RGS1Q08116 209 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 DHX9Q08211 1270 aaKnown RBP13.16□□□□□ -0.3
DNMT1-213ENST00000587604 PHKG1Q16816 387 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 DUPD1Q68J44 220 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 TTC27Q6P3X3 843 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 MEX3BQ6ZN04 569 aaKnown RBP13.16□□□□□ -0.3
DNMT1-213ENST00000587604 ABHD13Q7L211 337 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 CDH24Q86UP0 819 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 CYP4X1Q8N118 509 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 ARMC10Q8N2F6 343 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 TBC1D19Q8N5T2 526 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.16□□□□□ -0.3
DNMT1-213ENST00000587604 C2CD4AQ8NCU7 369 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-213ENST00000587604 TRIM58Q8NG06 486 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 OR56A3Q8NH54 315 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 NT5CQ8TCD5 201 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 PYCR2Q96C36 320 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 OR4K3Q96R72 315 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 ARL15Q9NXU5 204 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 ZFP69BQ9UJL9 534 aa13.16□□□□□ -0.3
DNMT1-213ENST00000587604 KLF13Q9Y2Y9 288 aaPredicted RBP13.16□□□□□ -0.3
DNMT1-213ENST00000587604 ITPR3Q14573 2671 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms