RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-208	ENST00000586548	C10orf111	Q8N326	155 aa		21.31	■■□□□ 1
CIRBP-208	ENST00000586548	OR2L3	Q8NG85	312 aa		21.31	■■□□□ 1
CIRBP-208	ENST00000586548	LCN9	Q8WX39	176 aa		21.31	■■□□□ 1
CIRBP-208	ENST00000586548	POP5	Q969H6	163 aa	Known RBP	21.31	■■□□□ 1
CIRBP-208	ENST00000586548	CENPN	Q96H22	339 aa	Predicted RBP	21.31	■■□□□ 1
CIRBP-208	ENST00000586548	F2RL3	Q96RI0	385 aa		21.31	■■□□□ 1
CIRBP-208	ENST00000586548	SLC6A20	Q9NP91	592 aa		21.31	■■□□□ 1
CIRBP-208	ENST00000586548	RAB26	Q9ULW5	256 aa		21.31	■■□□□ 1
CIRBP-208	ENST00000586548	ERVK-11	Q9UQG0	969 aa		21.31	■■□□□ 1
CIRBP-208	ENST00000586548	MRPS17	Q9Y2R5	130 aa	Known RBP	21.31	■■□□□ 1
CIRBP-208	ENST00000586548	NDUFS4	O43181	175 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548	RET	P07949	1114 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548	PPIB	P23284	216 aa	Known RBP	21.3	■■□□□ 1
CIRBP-208	ENST00000586548	CMPK1	P30085	196 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548	SLC14A1	Q13336	389 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548	CCNYL2	Q5T2Q4	361 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548	NRROS	Q86YC3	692 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548	SORBS1	Q9BX66	1292 aa	Known RBP	21.3	■■□□□ 1
CIRBP-208	ENST00000586548	GPR174	Q9BXC1	333 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548		Q9H521	79 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548	COQ10B	Q9H8M1	238 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548	SPHK1	Q9NYA1	384 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548	CORO2B	Q9UQ03	480 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548	FANCM	Q8IYD8	2048 aa		21.3	■■□□□ 1
CIRBP-208	ENST00000586548	CAPN5	O15484	640 aa	Predicted RBP	21.29	■■□□□ 1
CIRBP-208	ENST00000586548	LCMT2	O60294	686 aa	Known RBP	21.29	■■□□□ 1
CIRBP-208	ENST00000586548	TPST1	O60507	370 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	TNF	P01375	233 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	IL3	P08700	152 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	CHRM5	P08912	532 aa	Predicted RBP	21.29	■■□□□ 1
CIRBP-208	ENST00000586548	GSTM5	P46439	218 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	MC1R	Q01726	317 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	FOLH1	Q04609	750 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	ILF3	Q12906	894 aa	Known RBP eCLIP	21.29	■■□□□ 1
CIRBP-208	ENST00000586548	MED21	Q13503	144 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	TCEA2	Q15560	299 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	ATP6AP1	Q15904	470 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	FAM98B	Q52LJ0	330 aa	Known RBP	21.29	■■□□□ 1
CIRBP-208	ENST00000586548	SLC22A18AS	Q8N1D0	253 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	GALNT4	Q8N4A0	578 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	TBC1D19	Q8N5T2	526 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	GOT1L1	Q8NHS2	421 aa	Predicted RBP	21.29	■■□□□ 1
CIRBP-208	ENST00000586548	CREB3L4	Q8TEY5	395 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	FAM162A	Q96A26	154 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	RGMA	Q96B86	450 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	SEPHS2	Q99611	448 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	SARG	Q9BW04	601 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	UGT2B28	Q9BY64	529 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	C2orf42	Q9NWW7	574 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	ZNF282	Q9UDV7	671 aa	Predicted RBP	21.29	■■□□□ 1
CIRBP-208	ENST00000586548	ADAM29	Q9UKF5	820 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	VPS4A	Q9UN37	437 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	C1orf226	A1L170	272 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	ZNF217	O75362	1048 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	CREG1	O75629	220 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	RAP2A	P10114	183 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	EFNA1	P20827	205 aa	Predicted RBP	21.29	■■□□□ 1
CIRBP-208	ENST00000586548	SLC19A1	P41440	591 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	CCT8	P50990	548 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	GAS6	Q14393	721 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	ERICH5	Q6P6B1	374 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	ZNF551	Q7Z340	670 aa	Predicted RBP	21.29	■■□□□ 1
CIRBP-208	ENST00000586548	NUDT13	Q86X67	352 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	PLD3	Q8IV08	490 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	OR4A15	Q8NGL6	344 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	NCLN	Q969V3	563 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	RNF145	Q96MT1	663 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	CIB1	Q99828	191 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	TPT1P8	Q9HAU6	139 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	BATF3	Q9NR55	127 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	GPR27	Q9NS67	375 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	SPAST	Q9UBP0	616 aa		21.29	■■□□□ 1
CIRBP-208	ENST00000586548	ARHGAP10	A1A4S6	786 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	DENR	O43583	198 aa	Known RBP	21.28	■■□□□ 1
CIRBP-208	ENST00000586548	GPR37L1	O60883	481 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	MAPK12	P53778	367 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	MRPS35	P82673	323 aa	Known RBP	21.28	■■□□□ 1
CIRBP-208	ENST00000586548	CHRNB3	Q05901	458 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	BLMH	Q13867	455 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	INTS11	Q5TA45	600 aa	Known RBP	21.28	■■□□□ 1
CIRBP-208	ENST00000586548	CPZ	Q66K79	652 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	FBXL6	Q8N531	539 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	PACRGL	Q8N7B6	248 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	OR4E2	Q8NGC2	313 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	GPBAR1	Q8TDU6	330 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	JPH3	Q8WXH2	748 aa	Predicted RBP	21.28	■■□□□ 1
CIRBP-208	ENST00000586548	N4BP2L2	Q92802	583 aa	Predicted RBP	21.28	■■□□□ 1
CIRBP-208	ENST00000586548	DPH7	Q9BTV6	452 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	CHID1	Q9BWS9	393 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	SPATA9	Q9BWV2	254 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	YY1AP1	Q9H869	796 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	LTB4R2	Q9NPC1	389 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	OLAH	Q9NV23	265 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	KLF15	Q9UIH9	416 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548		V9GYQ6	96 aa		21.28	■■□□□ 1
CIRBP-208	ENST00000586548	ISM1	B1AKI9	464 aa		21.27	■■□□□ 1
CIRBP-208	ENST00000586548	RTCA	O00442	366 aa	Known RBP	21.27	■■□□□ 1
CIRBP-208	ENST00000586548	TBX19	O60806	448 aa		21.27	■■□□□ 1
CIRBP-208	ENST00000586548	AHR	P35869	848 aa		21.27	■■□□□ 1
CIRBP-208	ENST00000586548	BCL6	P41182	706 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms