RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 LRMDAQ9H2I8 198 aa11.79□□□□□ -0.52
ERCC2-207ENST00000586441 GPAMQ9HCL2 828 aa11.79□□□□□ -0.52
ERCC2-207ENST00000586441 SLC6A20Q9NP91 592 aa11.79□□□□□ -0.52
ERCC2-207ENST00000586441 ZNF71Q9NQZ8 489 aaPredicted RBP11.79□□□□□ -0.52
ERCC2-207ENST00000586441 TAC3Q9UHF0 121 aa11.79□□□□□ -0.52
ERCC2-207ENST00000586441 PDE10AQ9Y233 779 aa11.79□□□□□ -0.52
ERCC2-207ENST00000586441 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.79□□□□□ -0.52
ERCC2-207ENST00000586441 PTRH2Q9Y3E5 179 aaKnown RBP11.79□□□□□ -0.52
ERCC2-207ENST00000586441 IGLV3-12A0A075B6K2 115 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 LOC105369274A0A096LPK9 316 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 LOC102723532A0A0G2JNH3 316 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 A0A0J9YVX5 310 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 CCDC189A1A4V9 331 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 ARGFXA6NJG6 315 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 FCHO1O14526 889 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 ITM2AO43736 263 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 NPHS1O60500 1241 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 IPO13O94829 963 aaKnown RBP11.78□□□□□ -0.52
ERCC2-207ENST00000586441 TSPAN12O95859 305 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 FDXRP22570 491 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 SERPINB3P29508 390 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 CCL11P51671 97 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 PGDP52209 483 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 CDKN2DP55273 166 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 VSX2P58304 361 aaPredicted RBP11.78□□□□□ -0.52
ERCC2-207ENST00000586441 NFKB2Q00653 900 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 KCNC4Q03721 635 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 PDAP1Q13442 181 aaKnown RBP11.78□□□□□ -0.52
ERCC2-207ENST00000586441 FAM53BQ14153 422 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 RCN2Q14257 317 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 ACAP2Q15057 778 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 NKG7Q16617 165 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 CFAP157Q5JU67 520 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 RBM20Q5T481 1227 aaKnown RBP11.78□□□□□ -0.52
ERCC2-207ENST00000586441 CES4AQ5XG92 561 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 FRMPD2BQ6IN97 320 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 PIWIL4Q7Z3Z4 852 aaKnown RBP11.78□□□□□ -0.52
ERCC2-207ENST00000586441 MRGPREQ86SM8 312 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 OR4N4Q8N0Y3 316 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 CLEC1AQ8NC01 280 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 ATL1Q8WXF7 558 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 RERGQ96A58 199 aaPredicted RBP11.78□□□□□ -0.52
ERCC2-207ENST00000586441 NXNL1Q96CM4 212 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 NSL1Q96IY1 281 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 RILPQ96NA2 401 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 GPR78Q96P69 363 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 SMAD5Q99717 465 aaKnown RBP11.78□□□□□ -0.52
ERCC2-207ENST00000586441 ACAT2Q9BWD1 397 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 DRC3Q9H069 523 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 ZNF304Q9HCX3 659 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 CCDC177Q9NQR7 707 aaPredicted RBP11.78□□□□□ -0.52
ERCC2-207ENST00000586441 SEMA3GQ9NS98 782 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 STOX2Q9P2F5 926 aaPredicted RBP11.78□□□□□ -0.52
ERCC2-207ENST00000586441 VTI1BQ9UEU0 232 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 RAP2CQ9Y3L5 183 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 BSNQ9UPA5 3926 aa11.78□□□□□ -0.52
ERCC2-207ENST00000586441 KRT87PA6NCN2 255 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 H0YGG7 62 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 CNOT3O75175 753 aaKnown RBP11.77□□□□□ -0.53
ERCC2-207ENST00000586441 UMODP07911 640 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 SERPINA6P08185 405 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 CYC1P08574 325 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 KITP10721 976 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 CALB2P22676 271 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 VARSP26640 1264 aaKnown RBP11.77□□□□□ -0.53
ERCC2-207ENST00000586441 ARF3P61204 181 aaPredicted RBP11.77□□□□□ -0.53
ERCC2-207ENST00000586441 RPS15AP62244 130 aaKnown RBP11.77□□□□□ -0.53
ERCC2-207ENST00000586441 TLE1Q04724 770 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 CSHL1Q14406 222 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 DCAF10Q5QP82 559 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 LCTLQ6UWM7 567 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 PTRH1Q86Y79 214 aaKnown RBP11.77□□□□□ -0.53
ERCC2-207ENST00000586441 TMEM151AQ8N4L1 468 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 ARHGEF39Q8N4T4 335 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 AFAP1L2Q8N4X5 818 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 NKAPQ8N5F7 415 aaKnown RBP11.77□□□□□ -0.53
ERCC2-207ENST00000586441 CNDP1Q96KN2 507 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 UBXN10Q96LJ8 280 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 SORT1Q99523 831 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 NDNQ99608 321 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 SPSB2Q99619 263 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 OLFM1Q99784 485 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 HAUS8Q9BT25 410 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 SARGQ9BW04 601 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 GATA5Q9BWX5 397 aaPredicted RBP11.77□□□□□ -0.53
ERCC2-207ENST00000586441 SGPP1Q9BX95 441 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 C20orf27Q9GZN8 174 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 CLMPQ9H6B4 373 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 ATP13A2Q9NQ11 1180 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 IGSF5Q9NSI5 407 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 P4HTMQ9NXG6 502 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 GPR83Q9NYM4 423 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 CPSF2Q9P2I0 782 aaKnown RBP11.77□□□□□ -0.53
ERCC2-207ENST00000586441 XPR1Q9UBH6 696 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 ZNF282Q9UDV7 671 aaPredicted RBP11.77□□□□□ -0.53
ERCC2-207ENST00000586441 MARCOQ9UEW3 520 aaPredicted RBP11.77□□□□□ -0.53
ERCC2-207ENST00000586441 HAO1Q9UJM8 370 aa11.77□□□□□ -0.53
ERCC2-207ENST00000586441 NUP210LQ5VU65 1888 aa11.76□□□□□ -0.53
ERCC2-207ENST00000586441 PABPN1LA6NDY0 278 aaKnown RBP11.76□□□□□ -0.53
ERCC2-207ENST00000586441 DLX3O60479 287 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms