RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SCN2AQ99250 2005 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 NCOA6Q14686 2063 aaPredicted RBP13.56□□□□□ -0.24
SDF2-202ENST00000585428 ZNF860A6NHJ4 632 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 CEP104O60308 925 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 SLC25A12O75746 678 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 KRT14P02533 472 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 SLC35G6P0C7Q6 338 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 ABOP16442 354 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 ALOX12P18054 663 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 GABRB3P28472 473 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 CXCR5P32302 372 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 CYB561P49447 251 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 VPS41P49754 854 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 BTG2P78543 158 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 PHKG1Q16816 387 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 LRRC8EQ6NSJ5 796 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 UGT3A1Q6NUS8 523 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 TTC27Q6P3X3 843 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 PAQR3Q6TCH7 311 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 C3P1Q6ZMU1 363 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 STRA8Q7Z7C7 330 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 CPSF7Q8N684 471 aaKnown RBP13.56□□□□□ -0.24
SDF2-202ENST00000585428 SPC24Q8NBT2 197 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 SNF8Q96H20 258 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 OR4K3Q96R72 315 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 HAUS8Q9BT25 410 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 CLK4Q9HAZ1 481 aaKnown RBP13.56□□□□□ -0.24
SDF2-202ENST00000585428 MCCC2Q9HCC0 563 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 XAB2Q9HCS7 855 aaKnown RBP13.56□□□□□ -0.24
SDF2-202ENST00000585428 POLQO75417 2590 aa13.56□□□□□ -0.24
SDF2-202ENST00000585428 TRBC2A0A5B9 178 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 GOLGA8MH3BSY2 632 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 PRRG2O14669 202 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 OR1F1O43749 312 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 PRMT3O60678 531 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 TSPAN12O95859 305 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 B3GALT4O96024 378 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 SMIM10L1P0DMW3 83 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 HLCSP50747 726 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 CCR8P51685 355 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 MEF2AQ02078 507 aaPredicted RBP13.55□□□□□ -0.24
SDF2-202ENST00000585428 SP140Q13342 867 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 DEFB134Q4QY38 66 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 HSP90AA5PQ58FG0 334 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 DUPD1Q68J44 220 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 C2CD4AQ8NCU7 369 aaPredicted RBP13.55□□□□□ -0.24
SDF2-202ENST00000585428 OR56A3Q8NH54 315 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 C16orf52Q8NHV5 167 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 NT5CQ8TCD5 201 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 CA5BP1Q8WTZ4 195 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 SMIM10Q96HG1 83 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 PTCHD1Q96NR3 888 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 RBCK1Q9BYM8 510 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 IGSF5Q9NSI5 407 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 TAS2R13Q9NYV9 303 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 PKDREJQ9NTG1 2253 aa13.55□□□□□ -0.24
SDF2-202ENST00000585428 IGKV3D-11A0A0A0MRZ8 115 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 NDUFS4O43181 175 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 B4GALT2O60909 372 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 AHSGP02765 367 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 HIST1H2AGP0C0S8 130 aaPredicted RBP13.54□□□□□ -0.24
SDF2-202ENST00000585428 ZNF24P17028 368 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 IGFBP2P18065 325 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 HIST1H2ADP20671 130 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 JAK1P23458 1154 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 PTGER1P34995 402 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 RGS4P49798 205 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 CDKN2DP55273 166 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 TLE4Q04727 773 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 DHX9Q08211 1270 aaKnown RBP13.54□□□□□ -0.24
SDF2-202ENST00000585428 NIPAL1Q6NVV3 410 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 QSOX2Q6ZRP7 698 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 SULF2Q8IWU5 870 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 PALM2Q8IXS6 379 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 NAT8LQ8N9F0 302 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 POGLUT1Q8NBL1 392 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 FAM57AQ8TBR7 257 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 UTP15Q8TED0 518 aaKnown RBP13.54□□□□□ -0.24
SDF2-202ENST00000585428 ALKBH8Q96BT7 664 aaKnown RBP13.54□□□□□ -0.24
SDF2-202ENST00000585428 PYCR2Q96C36 320 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 SDCCAG3Q96C92 435 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 HIST1H2AHQ96KK5 128 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 NDNQ99608 321 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 HIST1H2AJQ99878 128 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 H2AFJQ9BTM1 129 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 LZTFL1Q9NQ48 299 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 IARS2Q9NSE4 1012 aaKnown RBP13.54□□□□□ -0.24
SDF2-202ENST00000585428 TRMT6Q9UJA5 497 aaKnown RBP13.54□□□□□ -0.24
SDF2-202ENST00000585428 ZFP69BQ9UJL9 534 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 MAD1L1Q9Y6D9 718 aa13.54□□□□□ -0.24
SDF2-202ENST00000585428 A0A1B0GTH9 108 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 TCRBV16S1A1N1A0A5B0 115 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 ZNF888P0CJ79 500 aaPredicted RBP13.53□□□□□ -0.24
SDF2-202ENST00000585428 AHRP35869 848 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 SCTRP47872 440 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 ITGA8P53708 1063 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 OLR1P78380 273 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 HYAL2Q12891 473 aa13.53□□□□□ -0.24
SDF2-202ENST00000585428 CATSPEREQ5SY80 951 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms