RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 FRMD6Q96NE9 622 aa14.1□□□□□ -0.15
VAPA-209ENST00000585042 OLFM1Q99784 485 aa14.1□□□□□ -0.15
VAPA-209ENST00000585042 CDCP1Q9H5V8 836 aa14.1□□□□□ -0.15
VAPA-209ENST00000585042 ARL15Q9NXU5 204 aa14.1□□□□□ -0.15
VAPA-209ENST00000585042 ZFP69BQ9UJL9 534 aa14.1□□□□□ -0.15
VAPA-209ENST00000585042 CORO1CQ9ULV4 474 aaPredicted RBP14.1□□□□□ -0.15
VAPA-209ENST00000585042 SH2B3Q9UQQ2 575 aa14.1□□□□□ -0.15
VAPA-209ENST00000585042 PDZD2O15018 2839 aa14.1□□□□□ -0.15
VAPA-209ENST00000585042 PGRMC1O00264 195 aaKnown RBP14.09□□□□□ -0.15
VAPA-209ENST00000585042 NDC80O14777 642 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 CHST10O43529 356 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 WISP2O76076 250 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 F7P08709 466 aaPredicted RBP14.09□□□□□ -0.15
VAPA-209ENST00000585042 GABRB3P28472 473 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 ADORA2A-AS1P86434 159 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 OC90Q02509 493 aaPredicted RBP14.09□□□□□ -0.15
VAPA-209ENST00000585042 RGS1Q08116 209 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 CSHL1Q14406 222 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 PHKG1Q16816 387 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 KCTD19Q17RG1 926 aaPredicted RBP14.09□□□□□ -0.15
VAPA-209ENST00000585042 RNASEH2BQ5TBB1 312 aaKnown RBP14.09□□□□□ -0.15
VAPA-209ENST00000585042 MBOAT1Q6ZNC8 495 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 QSOX2Q6ZRP7 698 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 SIAH3Q8IW03 269 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 GHDCQ8N2G8 530 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 SLC35F6Q8N357 371 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 TRPV3Q8NET8 790 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 ACTRT1Q8TDG2 376 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 PHF10Q8WUB8 498 aaKnown RBP14.09□□□□□ -0.15
VAPA-209ENST00000585042 ANKRD7Q92527 254 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 ALKBH8Q96BT7 664 aaKnown RBP14.09□□□□□ -0.15
VAPA-209ENST00000585042 LINGO1Q96FE5 620 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 MS4A14Q96JA4 679 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 NDNQ99608 321 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 KLHL1Q9NR64 748 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 LRFN1Q9P244 771 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 MEMO1Q9Y316 297 aa14.09□□□□□ -0.15
VAPA-209ENST00000585042 NCOA6Q14686 2063 aaPredicted RBP14.08□□□□□ -0.15
VAPA-209ENST00000585042 CSMD1Q96PZ7 3565 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 GOLGA6L10A0A0M3HER8 536 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 FAM227AF5H4B4 570 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 NDUFS4O43181 175 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 PRMT3O60678 531 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 CLDN14O95500 239 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 TSPAN12O95859 305 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 TRHRP34981 398 aaPredicted RBP14.08□□□□□ -0.16
VAPA-209ENST00000585042 SCTRP47872 440 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 CYB561P49447 251 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 CDKN2DP55273 166 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 DEFB134Q4QY38 66 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 GALNTL5Q7Z4T8 443 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 SPNS2Q8IVW8 549 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 SHISA5Q8N114 240 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 POGLUT1Q8NBL1 392 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 MTFMTQ96DP5 389 aaKnown RBP14.08□□□□□ -0.16
VAPA-209ENST00000585042 PTCHD1Q96NR3 888 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 OR4K3Q96R72 315 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 ANKRD10Q9NXR5 420 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 SH3BGRL2Q9UJC5 107 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 TINAGQ9UJW2 476 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 VWA7Q9Y334 891 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 PCNX1Q96RV3 2341 aa14.08□□□□□ -0.16
VAPA-209ENST00000585042 FBN2P35556 2912 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 NPIPA5E9PKD4 350 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 E9PLN8 166 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 CES2O00748 559 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 NME2P1O60361 137 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 SLC25A12O75746 678 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 CDC123O75794 336 aaPredicted RBP14.07□□□□□ -0.16
VAPA-209ENST00000585042 SMIM10L1P0DMW3 83 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 CAPN3P20807 821 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 NME2P22392 152 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 SSTR2P30874 369 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 HLCSP50747 726 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 MLF1P58340 268 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 GNG11P61952 73 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 SRSF11Q05519 484 aaKnown RBP14.07□□□□□ -0.16
VAPA-209ENST00000585042 MAPKAPK3Q16644 382 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.07□□□□□ -0.16
VAPA-209ENST00000585042 ARMC2Q8NEN0 867 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 OR5T3Q8NGG3 340 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 UTP15Q8TED0 518 aaKnown RBP14.07□□□□□ -0.16
VAPA-209ENST00000585042 SLC5A11Q8WWX8 675 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 TSLPQ969D9 159 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 TMEM125Q96AQ2 219 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 PYCR2Q96C36 320 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 SMIM10Q96HG1 83 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 LURAP1Q96LR2 239 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 SPOCK3Q9BQ16 436 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 VKORC1Q9BQB6 163 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 TRIM51Q9BSJ1 452 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 HES7Q9BYE0 225 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 SLC6A16Q9GZN6 736 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 PELI2Q9HAT8 420 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 PRDM9Q9NQV7 894 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 NPIPA1Q9UND3 350 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 PKDREJQ9NTG1 2253 aa14.07□□□□□ -0.16
VAPA-209ENST00000585042 GTF3C1Q12789 2109 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 TCRBV16S1A1N1A0A5B0 115 aa14.06□□□□□ -0.16
VAPA-209ENST00000585042 ZNF860A6NHJ4 632 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms