RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 MCF2LO15068 1137 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NDUFB4O95168 129 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CTDNEP1O95476 244 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GBAP04062 536 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 HEXAP06865 529 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ELANEP08246 267 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GSTA2P09210 222 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PRR23D2P0DMB1 279 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GLRA2P23416 452 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 HSD17B3P37058 310 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GPR143P51810 404 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GSDMDP57764 484 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NLRP11P59045 1033 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TAS2R40P59535 323 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ST8SIA6P61647 398 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NOP14P78316 857 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 COG7P83436 770 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF91Q05481 1191 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ACTN3Q08043 901 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 INCA1Q0VD86 236 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 LCP2Q13094 533 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC14A1Q13336 389 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PTPRCAPQ14761 206 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 DLG2Q15700 870 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZBTB6Q15916 424 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CCL14Q16627 93 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 EFHC1Q5JVL4 640 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 BRMS1LQ5PSV4 323 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PPM1LQ5SGD2 360 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 C6orf141Q5SZD1 244 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CENPPQ6IPU0 288 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PLBD1Q6P4A8 553 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GBP6Q6ZN66 633 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM57BQ71RH2 274 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM228AQ86W67 206 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 AMIGO1Q86WK6 493 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 RALGPS2Q86X27 583 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MCEMP1Q8IX19 187 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MRPL43Q8N983 215 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CCDC63Q8NA47 563 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 RNF149Q8NC42 400 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 RBM15BQ8NDT2 890 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TMEM161BQ8NDZ6 487 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 DUSP19Q8WTR2 217 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ADAMTS14Q8WXS8 1223 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MRPS31Q92665 395 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SLITRK1Q96PX8 696 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PCYT2Q99447 389 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NAP1L3Q99457 506 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TSGA10Q9BZW7 698 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CLSTN2Q9H4D0 955 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 HHATLQ9HCP6 504 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MRPL47Q9HD33 250 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 HINT3Q9NQE9 182 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CYSLTR2Q9NS75 346 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TXNDC16Q9P2K2 825 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ANAPC2Q9UJX6 822 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PLAGL1Q9UM63 463 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PIN4Q9Y237 131 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TICRRQ7Z2Z1 1910 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 BRCA2P51587 3418 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 WDR81Q562E7 1941 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 TTC26A0AVF1 554 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 ANXA2P2A6NMY6 339 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 HSPB2A8KAH6 182 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 H0YIZ8 118 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 KIF2AO00139 706 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 PIRO00625 290 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 CHADO15335 359 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 TGFB1I1O43294 461 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 SSX5O60225 188 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 DDAH2O95865 285 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 CCNE2O96020 404 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 CYP1A2P05177 515 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 KRT8P05787 483 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 KRT19P08727 400 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 LINGO3P0C6S8 592 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 CSF2RAP15509 400 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 RPS2P15880 293 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 EDN2P20800 178 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 ACAT1P24752 427 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 TEAD1P28347 426 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 MPGP29372 298 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 AVPR1AP37288 418 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 IFNAR2P48551 515 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 PNLIPRP2P54317 469 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 CSNK2A1P68400 391 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 GRIK2Q13002 908 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 GAB1Q13480 694 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 TSTA3Q13630 321 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 TRADDQ15628 312 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 HSPB2Q16082 182 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 CTF1Q16619 201 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 UBE2SQ16763 222 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 KLHL40Q2TBA0 621 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 HSDL1Q3SXM5 330 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 KRTCAP3Q53RY4 240 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 DNTTIP2Q5QJE6 756 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 MARCH8Q5T0T0 291 aa1.84□□□□□ -2.11
SMCHD1-211ENST00000584897 DCST1Q5T197 706 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms