RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 HOXC11O43248 304 aaPredicted RBP9.86□□□□□ -0.83
RFFL-212ENST00000584655 NUAK1O60285 661 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 ALBP02768 609 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 ANXA6P08133 673 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 CERS1P27544 350 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 PRLHRP49683 370 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 DMC1Q14565 340 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 RAB30Q15771 203 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 C18orf63Q68DL7 685 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 SIX5Q8N196 739 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 LEMD2Q8NC56 503 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 GAS2L1Q99501 681 aaPredicted RBP9.86□□□□□ -0.83
RFFL-212ENST00000584655 EPS8L2Q9H6S3 715 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 POPDC3Q9HBV1 291 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 SOHLH2Q9NX45 425 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 GIN1Q9NXP7 522 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 FRYQ5TBA9 3013 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 MDC1Q14676 2089 aaKnown RBP9.86□□□□□ -0.83
RFFL-212ENST00000584655 XPNPEP2O43895 674 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 LDB3O75112 727 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 VIPP01282 170 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 UQCRBP14927 111 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 CSRP3P50461 194 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 INHBCP55103 352 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 MAZP56270 477 aaKnown RBP9.86□□□□□ -0.83
RFFL-212ENST00000584655 P3H2Q8IVL5 708 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 CBARPQ8N350 705 aaPredicted RBP9.86□□□□□ -0.83
RFFL-212ENST00000584655 ENDOVQ8N8Q3 282 aaKnown RBP9.86□□□□□ -0.83
RFFL-212ENST00000584655 OR5T3Q8NGG3 340 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 ATOH1Q92858 354 aaPredicted RBP9.86□□□□□ -0.83
RFFL-212ENST00000584655 CCDC3Q9BQI4 270 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 SLC35A5Q9BS91 424 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 VCX3AQ9NNX9 186 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 ADAP2Q9NPF8 381 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 COLQQ9Y215 455 aaPredicted RBP9.86□□□□□ -0.83
RFFL-212ENST00000584655 SAMHD1Q9Y3Z3 626 aaKnown RBP9.86□□□□□ -0.83
RFFL-212ENST00000584655 PCDHGA11Q9Y5H2 935 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 COL4A3Q01955 1670 aa9.86□□□□□ -0.83
RFFL-212ENST00000584655 LRRC72A6NJI9 287 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 AGAP14A8MT82 685 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 ZW10O43264 779 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 CLPTM1O96005 669 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 IL6P05231 212 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 BCHEP06276 602 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 SRPRAP08240 638 aaKnown RBP9.85□□□□□ -0.83
RFFL-212ENST00000584655 HRH2P25021 359 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 FAM98BQ52LJ0 330 aaKnown RBP9.85□□□□□ -0.83
RFFL-212ENST00000584655 PRSS41Q7RTY9 318 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 TAGAPQ8N103 731 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 MPP4Q96JB8 637 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 COQ10AQ96MF6 247 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 APOOQ9BUR5 198 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 TTYH1Q9H313 450 aaPredicted RBP9.85□□□□□ -0.83
RFFL-212ENST00000584655 MRPS30Q9NP92 439 aaKnown RBP9.85□□□□□ -0.83
RFFL-212ENST00000584655 TMEM181Q9P2C4 612 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 TMX2-CTNND1H3BSU7 103 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 GSTM1P09488 218 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 JUPP14923 745 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 HTR1BP28222 390 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 EPHA2P29317 976 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 FMO3P31513 532 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 BUD31P41223 144 aaPredicted RBP9.85□□□□□ -0.83
RFFL-212ENST00000584655 MLLT10P55197 1068 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 CDH12P55289 794 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 GSTM4Q03013 218 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 LTB4RQ15722 352 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 PLEKHS1Q5SXH7 462 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 PDSS2Q86YH6 399 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 GATAD2AQ86YP4 633 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 LINC01555Q8NAE3 123 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 VPS37AQ8NEZ2 397 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 REXO5Q96IC2 774 aaKnown RBP9.85□□□□□ -0.83
RFFL-212ENST00000584655 RHNO1Q9BSD3 238 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 RMND5AQ9H871 391 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 FRMPD3Q5JV73 1810 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 PI4KAP42356 2102 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 FAM170BA6NMN3 283 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 PGRMC2O15173 223 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 HSMCR30P0CW71 290 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 C1GALT1C1LP0DN25 315 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 ACADSP16219 412 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 XKR7Q5GH72 579 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 TMEM236Q5W0B7 351 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 DLEU7Q6UYE1 221 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 ZDHHC13Q8IUH4 622 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 TSTD1Q8NFU3 115 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 FATE1Q969F0 183 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 CEP295NLQ96MC4 621 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 ZNF583Q96ND8 569 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 SLC2A11Q9BYW1 496 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 ZNF385DQ9H6B1 395 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 ETAA1Q9NY74 926 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 ABCG2Q9UNQ0 655 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 DCHS1Q96JQ0 3298 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 SLC5A10A0PJK1 596 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 KPNA4O00629 521 aaPredicted RBP9.85□□□□□ -0.83
RFFL-212ENST00000584655 HNRNPRO43390 633 aaKnown RBP9.85□□□□□ -0.83
RFFL-212ENST00000584655 B4GALT2O60909 372 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 CREG1O75629 220 aa9.85□□□□□ -0.83
RFFL-212ENST00000584655 SNRNP200O75643 2136 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms