RNA–Protein interactions for RNA: ENST00000584601.5

ERBB2-219, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-219ENST00000584601 PRAMEF14Q5SWL7 426 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 PRAMEF13Q5VWM6 474 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 SLC30A8Q8IWU4 369 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 NPAS3Q8IXF0 933 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 ACVR1CQ8NER5 493 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 IRF7Q92985 503 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 ZBED6CLQ96FA7 236 aaPredicted RBP11.79□□□□□ -0.52
ERBB2-219ENST00000584601 ALPK1Q96QP1 1244 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 OR2B2Q9GZK3 357 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 SACM1LQ9NTJ5 587 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 MS4A12Q9NXJ0 267 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 DNAJC27Q9NZQ0 273 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 EIF3KQ9UBQ5 218 aaKnown RBP11.79□□□□□ -0.52
ERBB2-219ENST00000584601 HEBP2Q9Y5Z4 205 aa11.79□□□□□ -0.52
ERBB2-219ENST00000584601 MYO5AQ9Y4I1 1855 aaKnown RBP11.79□□□□□ -0.52
ERBB2-219ENST00000584601 SOX14O95416 240 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 ATF6P18850 670 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 CBLBQ13191 982 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 SP140Q13342 867 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 TMEM44Q2T9K0 475 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 CLLU1OSQ5K130 101 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 ADNP2Q6IQ32 1131 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 MAVSQ7Z434 540 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 TAF8Q7Z7C8 310 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 THOC6Q86W42 341 aaKnown RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 TMEM102Q8N9M5 508 aaPredicted RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 NFKBIDQ8NI38 313 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 OTUB2Q96DC9 234 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 MGLLQ99685 303 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 ZNF451Q9Y4E5 1061 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 DDX60LQ5H9U9 1706 aaKnown RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 CPSF4LA6NMK7 179 aaKnown RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 TGFB1P01137 390 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 ACP5P13686 325 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 ZNF26P17031 533 aaPredicted RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 KCNA5P22460 613 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 LMAN2Q12907 356 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 LARS2Q15031 903 aaKnown RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 LARP4Q71RC2 724 aaKnown RBP eCLIP11.78□□□□□ -0.525e-10■□□□□ 10.9
ERBB2-219ENST00000584601 ZNF598Q86UK7 904 aaKnown RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 LRRTM4Q86VH4 590 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 FAM129CQ86XR2 697 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 SPARTQ8N0X7 666 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 FAM110BQ8TC76 370 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 FRS2Q8WU20 508 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 SH3YL1Q96HL8 342 aaPredicted RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 LMLNQ96KR4 655 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 BCL7BQ9BQE9 202 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 IL1RAPQ9NPH3 570 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 HSPE1-MOB4S4R3N1 261 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 SMIM30A4D0T7 59 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 GTPBP1O00178 669 aaKnown RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 SCAMP1O15126 338 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 TLX2O43763 284 aaPredicted RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 AKAP8O43823 692 aaKnown RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 DCTP40126 519 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 PIK3CBP42338 1070 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 AP3S2P59780 193 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 GRSF1Q12849 480 aaKnown RBP eCLIP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 RAPSNQ13702 412 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 ABRAXAS2Q15018 415 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 C2orf27AQ580R0 203 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 KIAA1161Q6NSJ0 714 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 TRNP1Q6NT89 227 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 MBOAT1Q6ZNC8 495 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 SCD5Q86SK9 330 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 C3orf58Q8NDZ4 430 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 OR10H4Q8NGA5 316 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 SLC35G5Q96KT7 338 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 SRMSQ9H3Y6 488 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 MRPS30Q9NP92 439 aaKnown RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 AP1G1O43747 822 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 POP7O75817 140 aaKnown RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 LATS1O95835 1130 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 STSP08842 583 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 GDI1P31150 447 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 CCR8P51685 355 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 ZNF311Q5JNZ3 666 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 POMGNT2Q8NAT1 580 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 SLC37A3Q8NCC5 494 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 FAM46DQ8NEK8 389 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 TNFAIP8L1Q8WVP5 186 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 ZCCHC3Q9NUD5 404 aaKnown RBP11.78□□□□□ -0.52
ERBB2-219ENST00000584601 CMAHPQ9Y471 501 aa11.78□□□□□ -0.52
ERBB2-219ENST00000584601 TCRBV5S1A1TA0A578 114 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 RIIAD1A6NNX1 92 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 MITFO75030 526 aaPredicted RBP11.77□□□□□ -0.52
ERBB2-219ENST00000584601 CSF2RAP15509 400 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 SYN1P17600 705 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 NT5EP21589 574 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 PCSK6P29122 969 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 ACSL1P33121 698 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 PTGS2P35354 604 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 HNF1BP35680 557 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 BDKRB1P46663 353 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 HTR6P50406 440 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 NDUFA9Q16795 377 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 SHQ1Q6PI26 577 aaKnown RBP11.77□□□□□ -0.52
ERBB2-219ENST00000584601 AGTRAPQ6RW13 159 aa11.77□□□□□ -0.52
ERBB2-219ENST00000584601 TTLQ8NG68 377 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms