RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SAP25Q8TEE9 199 aa4.79□□□□□ -1.64
SMARCE1-219ENST00000583294 OMA1Q96E52 524 aa4.79□□□□□ -1.64
SMARCE1-219ENST00000583294 USP28Q96RU2 1077 aa4.79□□□□□ -1.64
SMARCE1-219ENST00000583294 PRMT1Q99873 361 aaKnown RBP4.79□□□□□ -1.64
SMARCE1-219ENST00000583294 C17orf62Q9BQA9 187 aa4.79□□□□□ -1.64
SMARCE1-219ENST00000583294 ZNF350Q9GZX5 532 aa4.79□□□□□ -1.64
SMARCE1-219ENST00000583294 BARHL2Q9NY43 387 aa4.79□□□□□ -1.64
SMARCE1-219ENST00000583294 ERRFI1Q9UJM3 462 aaPredicted RBP4.79□□□□□ -1.64
SMARCE1-219ENST00000583294 LEF1Q9UJU2 399 aaPredicted RBP4.79□□□□□ -1.64
SMARCE1-219ENST00000583294 SATB2Q9UPW6 733 aa4.79□□□□□ -1.64
SMARCE1-219ENST00000583294 ITM2BQ9Y287 266 aa4.79□□□□□ -1.64
SMARCE1-219ENST00000583294 A0A0A6YYC8 382 aaPredicted RBP4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 SMIM30A4D0T7 59 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 H0YIG0 161 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 I3L1I5 382 aaPredicted RBP4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 ZSCAN5DPP0CG00 497 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 SRD5A2P31213 254 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 SERPINB6P35237 376 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 OR3A3P47888 321 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 SNU13P55769 128 aaKnown RBP4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 FKBP1BP68106 108 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 C17orf67Q0P5P2 114 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 PPA1Q15181 289 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 FAM189A2Q15884 450 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 SMU1Q2TAY7 513 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 FAM106AQ4KMX7 169 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 MACC1Q6ZN28 852 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 KCTD9Q7L273 389 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 TRMT11Q7Z4G4 463 aaKnown RBP4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 OR4D10Q8NGI6 311 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 SLCO2A1Q92959 643 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 RFT1Q96AA3 541 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 CDKN2AIPNLQ96HQ2 116 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 ZNF300Q96RE9 604 aaPredicted RBP4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 IL12RB2Q99665 862 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 HOXD1Q9GZZ0 328 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 C3orf14Q9HBI5 128 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 TMED7Q9Y3B3 224 aa4.78□□□□□ -1.64
SMARCE1-219ENST00000583294 PFASO15067 1338 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 NEDD4P46934 1319 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 IGLV7-46A0A075B6I9 117 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 ZNF732B4DXR9 585 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 SURF4O15260 269 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 SCO2O43819 266 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 GLCEO94923 617 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 TYMPP19971 482 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 CLK1P49759 484 aaKnown RBP4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 RPP38P78345 283 aaKnown RBP4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 IRX1P78414 480 aaPredicted RBP4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 LRRC38Q5VT99 294 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 TMEM270Q6UE05 265 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 C17orf107Q6ZR85 190 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 KLHDC8AQ8IYD2 350 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 PTP4A1Q93096 173 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 WBP2Q969T9 261 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 AP2M1Q96CW1 435 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 SNRNP40Q96DI7 357 aaKnown RBP4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 RASL10BQ96S79 203 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 KRT12Q99456 494 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 MTIF3Q9H2K0 278 aaKnown RBP4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 B3GAT2Q9NPZ5 323 aa4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 MRPL17Q9NRX2 175 aaKnown RBP4.77□□□□□ -1.65
SMARCE1-219ENST00000583294 C13orf42A0A1B0GVH6 325 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 CCDC162PA2VCL2 907 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 CYSRT1A8MQ03 144 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 NPIPB9F8W1W9 429 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 ARHGEF9O43307 516 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 ECE2O60344 883 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 LRCH4O75427 683 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 UROSP10746 265 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 CTNNA2P26232 953 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 NME5P56597 212 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 STX1BP61266 288 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 IRX4P78413 519 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 DHODHQ02127 395 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 ZC2HC1BQ5TFG8 222 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 SLC27A4Q6P1M0 643 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 ZER1Q7Z7L7 766 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 SNX32Q86XE0 403 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 TEX26Q8N6G2 289 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 CCDC185Q8N715 623 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 RPLP0P6Q8NHW5 317 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 CASP10Q92851 521 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 CNRIP1Q96F85 164 aaPredicted RBP4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 PANX3Q96QZ0 392 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 OPRPNQ99935 248 aaPredicted RBP4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 MED20Q9H944 212 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 IL1RAPL2Q9NP60 686 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 GPR173Q9NS66 373 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 BAIAP2L1Q9UHR4 511 aa4.76□□□□□ -1.65
SMARCE1-219ENST00000583294 MAGEB16A2A368 324 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 LRRD1A4D1F6 860 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 GRAP2O75791 330 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 LETM1O95202 739 aaPredicted RBP4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 SBK2P0C263 348 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 PDHA2P29803 388 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 CTNNB1P35222 781 aa4.75□□□□□ -1.65
SMARCE1-219ENST00000583294 SLC1A3P43003 542 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms