RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PGM2Q96G03 612 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 FAM169AQ9Y6X4 670 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 NPHP3Q7Z494 1330 aa3.09□□□□□ -1.91
COPS3-217ENST00000583160 NCOA1Q15788 1441 aa3.09□□□□□ -1.92
COPS3-217ENST00000583160 UHRF1BP1Q6BDS2 1440 aa3.09□□□□□ -1.92
COPS3-217ENST00000583160 TCOF1Q13428 1488 aaKnown RBP3.09□□□□□ -1.92
COPS3-217ENST00000583160 MBD5Q9P267 1494 aa3.09□□□□□ -1.92
COPS3-217ENST00000583160 ARHGAP5Q13017 1502 aa3.09□□□□□ -1.92
COPS3-217ENST00000583160 ADGBQ8N7X0 1667 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 A0A087WZ39 114 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 IQCMA0A1B0GVH7 501 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 RTCAO00442 366 aaKnown RBP3.08□□□□□ -1.92
COPS3-217ENST00000583160 TADA2AO75478 443 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 PSMD10O75832 226 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 OR52Z1P0C646 297 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 NR2F1P10589 423 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 F3P13726 295 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 MC5RP33032 325 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 KHKP50053 298 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 PRELPP51888 382 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 UBASH3AP57075 661 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 TRA2BP62995 288 aaKnown RBP3.08□□□□□ -1.92
COPS3-217ENST00000583160 IFI35P80217 286 aaPredicted RBP3.08□□□□□ -1.92
COPS3-217ENST00000583160 TMEM266Q2M3C6 531 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 WDR78Q5VTH9 848 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 KRT39Q6A163 491 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 REG3GQ6UW15 175 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 TLK2Q86UE8 772 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 ZBED8Q8IZ13 594 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 SLC22A15Q8IZD6 547 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 MAML2Q8IZL2 1156 aaPredicted RBP3.08□□□□□ -1.92
COPS3-217ENST00000583160 FGFRL1Q8N441 504 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 RTL3Q8N8U3 475 aaKnown RBP3.08□□□□□ -1.92
COPS3-217ENST00000583160 POMGNT2Q8NAT1 580 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 POGLUT1Q8NBL1 392 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 KLHL30-AS1Q8NEE0 82 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 RPLP0P6Q8NHW5 317 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 NEDD4LQ96PU5 975 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 CCDC28BQ9BUN5 200 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 RIMS4Q9H426 269 aaPredicted RBP3.08□□□□□ -1.92
COPS3-217ENST00000583160 RNF121Q9H920 327 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 CELA1Q9UNI1 258 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 PASKQ96RG2 1323 aa3.08□□□□□ -1.92
COPS3-217ENST00000583160 TRBC2A0A5B9 178 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 ZNF354AO60765 605 aaPredicted RBP3.07□□□□□ -1.92
COPS3-217ENST00000583160 MTRF1O75570 445 aaKnown RBP3.07□□□□□ -1.92
COPS3-217ENST00000583160 SLCO2B1O94956 709 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 STARD3NLO95772 234 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 RPLP0P05388 317 aaKnown RBP3.07□□□□□ -1.92
COPS3-217ENST00000583160 PKLRP30613 574 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 HSD17B3P37058 310 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 HSPA2P54652 639 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 DLK1P80370 383 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 PTGISQ16647 500 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 UPP1Q16831 310 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 LACTB2Q53H82 288 aaPredicted RBP3.07□□□□□ -1.92
COPS3-217ENST00000583160 ARMC4Q5T2S8 1044 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 NAA16Q6N069 864 aaPredicted RBP3.07□□□□□ -1.92
COPS3-217ENST00000583160 PRSS55Q6UWB4 352 aaPredicted RBP3.07□□□□□ -1.92
COPS3-217ENST00000583160 CCDC60Q8IWA6 550 aaPredicted RBP3.07□□□□□ -1.92
COPS3-217ENST00000583160 C4orf32Q8N8J7 132 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 CSNK1G2-AS1Q8NCQ2 148 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 RHOXF1Q8NHV9 184 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 NXPE2Q96DL1 559 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 LRRC3BQ96PB8 259 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 OCR1Q9BZK8 76 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 XAB2Q9HCS7 855 aaKnown RBP3.07□□□□□ -1.92
COPS3-217ENST00000583160 ABCB10Q9NRK6 738 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 MORF4L1Q9UBU8 362 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 FBXL4Q9UKA2 621 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 PILRBQ9UKJ0 227 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 POMT2Q9UKY4 750 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 MRPS18CQ9Y3D5 142 aaKnown RBP3.07□□□□□ -1.92
COPS3-217ENST00000583160 CEP162Q5TB80 1403 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 ATP7AQ04656 1500 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 MAP3K1Q13233 1512 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 TDRD6O60522 2096 aaKnown RBP3.07□□□□□ -1.92
COPS3-217ENST00000583160 NOTCH2Q04721 2471 aa3.07□□□□□ -1.92
COPS3-217ENST00000583160 hCG_38984A0A1B0GV85 526 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 TRIM49BA6NDI0 452 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 ARHGEF33A8MVX0 844 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 C17orf105B2RV13 164 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 F8VVB4 439 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 F8VWA3 439 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 RNF103O00237 685 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 PDHXO00330 501 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 MAGEB2O15479 319 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 SH3BP5O60239 455 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 MED14O60244 1454 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 DEPDC5O75140 1603 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 A2MP01023 1474 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 PRG2P13727 222 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 GPR183P32249 361 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 NEDD4P46934 1319 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 CACNG1Q06432 222 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 ARHGEF5Q12774 1597 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 PTPRKQ15262 1439 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 C9orf152Q5JTZ5 239 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 AGAP7PQ5VUJ5 663 aa3.06□□□□□ -1.92
COPS3-217ENST00000583160 BAIAP2L2Q6UXY1 529 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms