RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SLC6A16Q9GZN6 736 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 SPRTNQ9H040 489 aaPredicted RBP13.61□□□□□ -0.23
SKA2-205ENST00000580541 NSRP1Q9H0G5 558 aaKnown RBP13.61□□□□□ -0.23
SKA2-205ENST00000580541 ZNF395Q9H8N7 513 aaPredicted RBP13.61□□□□□ -0.23
SKA2-205ENST00000580541 ACTR5Q9H9F9 607 aaPredicted RBP13.61□□□□□ -0.23
SKA2-205ENST00000580541 ANKHQ9HCJ1 492 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 PNPOQ9NVS9 261 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 SLC12A4Q9UP95 1085 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 SATB2Q9UPW6 733 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 RUVBL1Q9Y265 456 aaKnown RBP13.61□□□□□ -0.23
SKA2-205ENST00000580541 SEC16AO15027 2179 aa13.61□□□□□ -0.23
SKA2-205ENST00000580541 SPTBP11277 2137 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 KIF26BQ2KJY2 2108 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 AGRPO00253 132 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 NVLO15381 856 aaKnown RBP13.6□□□□□ -0.23
SKA2-205ENST00000580541 NRP2O60462 931 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 EDF1O60869 148 aaKnown RBP13.6□□□□□ -0.23
SKA2-205ENST00000580541 CPNE3O75131 537 aaKnown RBP13.6□□□□□ -0.23
SKA2-205ENST00000580541 TNFSF15O95150 251 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 ALOX12P18054 663 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 AGXTP21549 392 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 ALAS2P22557 587 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 CD82P27701 267 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 MAD2L1Q13257 205 aaPredicted RBP13.6□□□□□ -0.23
SKA2-205ENST00000580541 ADPRMQ3LIE5 342 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 UGT3A2Q3SY77 523 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 SPIN4Q56A73 249 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 TOR1AIP1Q5JTV8 583 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 TMEM214Q6NUQ4 689 aaKnown RBP13.6□□□□□ -0.23
SKA2-205ENST00000580541 IGF2-ASQ6U949 168 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 FAM47EQ6ZV65 393 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 LRRC34Q8IZ02 419 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 PROKR1Q8TCW9 393 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 CLIP3Q96DZ5 547 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 C19orf60Q96EN9 201 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 CHMP6Q96FZ7 201 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 C17orf62Q9BQA9 187 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 COPS7BQ9H9Q2 264 aaPredicted RBP13.6□□□□□ -0.23
SKA2-205ENST00000580541 SLCO1B3Q9NPD5 702 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 CUTCQ9NTM9 273 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 PTPRBP23467 1997 aa13.6□□□□□ -0.23
SKA2-205ENST00000580541 ARHGAP10A1A4S6 786 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 FAM149AA5PLN7 773 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 GMNCA6NCL1 334 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 H0YIG0 161 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 DSCR3O14972 297 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 ERI3O43414 337 aaKnown RBP13.59□□□□□ -0.23
SKA2-205ENST00000580541 GUCY1B2O75343 617 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 RSL1D1O76021 490 aaKnown RBP13.59□□□□□ -0.23
SKA2-205ENST00000580541 CD63P08962 238 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 CCNYL3P0C7X3 344 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 LINC00032P0C843 101 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 CLDN6P56747 220 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 GNGT1P63211 74 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 GABREP78334 506 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 ACSM2AQ08AH3 577 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 ABHD18Q0P651 414 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 FOXC1Q12948 553 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 SMU1Q2TAY7 513 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 HKDC1Q2TB90 917 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 ATP6AP1LQ52LC2 224 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 ACSM2BQ68CK6 577 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 OR4C11Q6IEV9 310 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 RHBDD2Q6NTF9 364 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 PWWP2BQ6NUJ5 590 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 VN1R5Q7Z5H4 357 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 KCT2Q8NC54 265 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 MS4A6EQ96DS6 147 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 LRFN5Q96NI6 719 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 SLC46A1Q96NT5 459 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 F2RL3Q96RI0 385 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 ULBP3Q9BZM4 244 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 OR51B5Q9H339 312 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 TNFRSF12AQ9NP84 129 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 FARSBQ9NSD9 589 aaKnown RBP13.59□□□□□ -0.23
SKA2-205ENST00000580541 STARD5Q9NSY2 213 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 C1orf109Q9NX04 203 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 NDOR1Q9UHB4 597 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 ADAM29Q9UKF5 820 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 ADAM21Q9UKJ8 722 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 TMED5Q9Y3A6 229 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 PCDHGA7Q9Y5G6 932 aa13.59□□□□□ -0.23
SKA2-205ENST00000580541 A0A1B0GX78 115 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 TMEM233B4DJY2 109 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 NPIPB8E9PQR5 432 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 H3BMH7 237 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 PIP5K1BO14986 540 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 HCRTR1O43613 425 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 HYAL3O43820 417 aaPredicted RBP13.58□□□□□ -0.24
SKA2-205ENST00000580541 B3GALT2O43825 422 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 SEC22BO75396 215 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 SKAP2O75563 359 aaPredicted RBP13.58□□□□□ -0.24
SKA2-205ENST00000580541 ITIH1P19827 911 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 PRPH2P23942 346 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 MAPK1P28482 360 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 LSP1P33241 339 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 GSTM5P46439 218 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 PLA2G16P53816 162 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 MTTPP55157 894 aa13.58□□□□□ -0.24
SKA2-205ENST00000580541 RTP5Q14D33 572 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms