RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 LAPTM5Q13571 262 aa19.01■□□□□ 0.63
SMG8-204ENST00000580498 RCN2Q14257 317 aa19.01■□□□□ 0.63
SMG8-204ENST00000580498 NSDHLQ15738 373 aa19.01■□□□□ 0.63
SMG8-204ENST00000580498 BTBD16Q32M84 506 aa19.01■□□□□ 0.63
SMG8-204ENST00000580498 FAM180AQ6UWF9 173 aa19.01■□□□□ 0.63
SMG8-204ENST00000580498 TAOK1Q7L7X3 1001 aa19.01■□□□□ 0.63
SMG8-204ENST00000580498 KLHDC8AQ8IYD2 350 aa19.01■□□□□ 0.63
SMG8-204ENST00000580498 KIAA1191Q96A73 305 aa19.01■□□□□ 0.63
SMG8-204ENST00000580498 SNRNP40Q96DI7 357 aaKnown RBP19.01■□□□□ 0.63
SMG8-204ENST00000580498 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMG8-204ENST00000580498 PCDHGA10Q9Y5H3 936 aa19.01■□□□□ 0.63
SMG8-204ENST00000580498 IKBKGQ9Y6K9 419 aa19.01■□□□□ 0.63
SMG8-204ENST00000580498 TRAV17A0A0B4J275 112 aa19■□□□□ 0.63
SMG8-204ENST00000580498 CCDC189A1A4V9 331 aa19■□□□□ 0.63
SMG8-204ENST00000580498 CTAGE15A4D2H0 777 aa19■□□□□ 0.63
SMG8-204ENST00000580498 ZNF860A6NHJ4 632 aa19■□□□□ 0.63
SMG8-204ENST00000580498 LTA4HP09960 611 aaKnown RBP19■□□□□ 0.63
SMG8-204ENST00000580498 CTAGE8P0CG41 777 aa19■□□□□ 0.63
SMG8-204ENST00000580498 RNH1P13489 461 aaKnown RBP19■□□□□ 0.63
SMG8-204ENST00000580498 CD1DP15813 335 aa19■□□□□ 0.63
SMG8-204ENST00000580498 SLC6A12P48065 614 aa19■□□□□ 0.63
SMG8-204ENST00000580498 SLBPQ14493 270 aaKnown RBP eCLIP19■□□□□ 0.63
SMG8-204ENST00000580498 ABRAXAS2Q15018 415 aa19■□□□□ 0.63
SMG8-204ENST00000580498 PCOLCEQ15113 449 aa19■□□□□ 0.63
SMG8-204ENST00000580498 ZKSCAN8Q15776 578 aaPredicted RBP19■□□□□ 0.63
SMG8-204ENST00000580498 UAP1Q16222 522 aaPredicted RBP19■□□□□ 0.63
SMG8-204ENST00000580498 PDK4Q16654 411 aa19■□□□□ 0.63
SMG8-204ENST00000580498 PLAG1Q6DJT9 500 aa19■□□□□ 0.63
SMG8-204ENST00000580498 KLC3Q6P597 504 aa19■□□□□ 0.63
SMG8-204ENST00000580498 CTAGE6Q86UF2 777 aa19■□□□□ 0.63
SMG8-204ENST00000580498 CUZD1Q86UP6 607 aa19■□□□□ 0.63
SMG8-204ENST00000580498 CTAGE4Q8IX94 777 aa19■□□□□ 0.63
SMG8-204ENST00000580498 AFAP1L2Q8N4X5 818 aa19■□□□□ 0.63
SMG8-204ENST00000580498 SIRT6Q8N6T7 355 aa19■□□□□ 0.63
SMG8-204ENST00000580498 EXT2Q93063 718 aa19■□□□□ 0.63
SMG8-204ENST00000580498 UBE2E3Q969T4 207 aa19■□□□□ 0.63
SMG8-204ENST00000580498 LRRC1Q9BTT6 524 aa19■□□□□ 0.63
SMG8-204ENST00000580498 EFCAB11Q9BUY7 163 aa19■□□□□ 0.63
SMG8-204ENST00000580498 UNKQ9C0B0 810 aaKnown RBP19■□□□□ 0.63
SMG8-204ENST00000580498 EHD1Q9H4M9 534 aa19■□□□□ 0.63
SMG8-204ENST00000580498 ZBTB20Q9HC78 741 aaPredicted RBP19■□□□□ 0.63
SMG8-204ENST00000580498 NUDT4Q9NZJ9 180 aa19■□□□□ 0.63
SMG8-204ENST00000580498 ACOT9Q9Y305 439 aa19■□□□□ 0.63
SMG8-204ENST00000580498 UBR5O95071 2799 aaPredicted RBP19■□□□□ 0.63
SMG8-204ENST00000580498 CNTRLQ7Z7A1 2325 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 A0A087X1B8 175 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 SYNDIG1LA6NDD5 238 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 MAGEB17A8MXT2 336 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 JRKO75564 520 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 SEC24DO94855 1032 aaPredicted RBP18.99■□□□□ 0.63
SMG8-204ENST00000580498 GGT5P36269 586 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 HNF4AP41235 474 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 Q0VFX4 171 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 ESPL1Q14674 2120 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 INAQ16352 499 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 FAM83EQ2M2I3 478 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 ZXDCQ2QGD7 858 aaPredicted RBP18.99■□□□□ 0.63
SMG8-204ENST00000580498 GLE1Q53GS7 698 aaKnown RBP18.99■□□□□ 0.63
SMG8-204ENST00000580498 PRR30Q53SZ7 412 aaPredicted RBP18.99■□□□□ 0.63
SMG8-204ENST00000580498 TOR1AIP1Q5JTV8 583 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 ZDHHC24Q6UX98 284 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 LRRC70Q7Z2Q7 622 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 ANKRD37Q7Z713 158 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 SPATA6LQ8N4H0 392 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 PDPRQ8NCN5 879 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 PLPP5Q8NEB5 264 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 ADAMTS18Q8TE60 1221 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 GAL3ST3Q96A11 431 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 TRIM44Q96DX7 344 aaPredicted RBP18.99■□□□□ 0.63
SMG8-204ENST00000580498 PTCD3Q96EY7 689 aaKnown RBP18.99■□□□□ 0.63
SMG8-204ENST00000580498 ZNF354BQ96LW1 612 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 RBCK1Q9BYM8 510 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 SLC6A16Q9GZN6 736 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 NT5DC2Q9H857 520 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 COPS7BQ9H9Q2 264 aaPredicted RBP18.99■□□□□ 0.63
SMG8-204ENST00000580498 KCNK13Q9HB14 408 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 ASF1BQ9NVP2 202 aa18.99■□□□□ 0.63
SMG8-204ENST00000580498 MRPS33Q9Y291 106 aaKnown RBP18.99■□□□□ 0.63
SMG8-204ENST00000580498 ESYT3A0FGR9 886 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 SUPT3HB4E1H0 165 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 CHST10O43529 356 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 CCNT2O60583 730 aaKnown RBP18.98■□□□□ 0.63
SMG8-204ENST00000580498 PRMT3O60678 531 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 SUPT3HO75486 399 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 CDC123O75794 336 aaPredicted RBP18.98■□□□□ 0.63
SMG8-204ENST00000580498 GDF5P43026 501 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 HSPA7P48741 367 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 OR4D2P58180 307 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 RAB8AP61006 207 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 XKR6Q5GH73 641 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 TRIM40Q6P9F5 258 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 SLCO4C1Q6ZQN7 724 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 PDSS2Q86YH6 399 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 OR1N1Q8NGS0 311 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 M1APQ8TC57 530 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 UTP15Q8TED0 518 aaKnown RBP18.98■□□□□ 0.63
SMG8-204ENST00000580498 HAS2Q92819 552 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 MOCOSQ96EN8 888 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 UBXN10Q96LJ8 280 aa18.98■□□□□ 0.63
SMG8-204ENST00000580498 MAGEB10Q96LZ2 347 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms