RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 IGHV5-10-1A0A0J9YXX1 117 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 DYTNA2CJ06 578 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 ERICH4A6NGS2 130 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 HAT1O14929 419 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 TOX3O15405 576 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 MT-CO3P00414 261 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 TGFB1P01137 390 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 ESRRAP11474 423 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 CALB2P22676 271 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 TSFMP43897 325 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 CLNS1AP54105 237 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 SKP1P63208 163 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 KLF10Q13118 480 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 HERC3Q15034 1050 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 TMTC4Q5T4D3 741 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 DEPDC1Q5TB30 811 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 IL23RQ5VWK5 629 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 KHDRBS2Q5VWX1 349 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 CDCP2Q5VXM1 449 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 ASPGQ86U10 573 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 TRIM73Q86UV7 250 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 KMT5CQ86Y97 462 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 C19orf47Q8N9M1 422 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 GLB1L3Q8NCI6 653 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 ZNF740Q8NDX6 193 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 RP9Q8TA86 221 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 TSPEARQ8WU66 669 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 SLC13A3Q8WWT9 602 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 ADAMTS14Q8WXS8 1223 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 N4BP2L2Q92802 583 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 CCDC74BQ96LY2 380 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 TMEM74Q96NL1 305 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 CCDC106Q9BWC9 280 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 MS4A8Q9BY19 250 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 BRINP2Q9C0B6 783 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 ROGDIQ9GZN7 287 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 CHRNA10Q9GZZ6 450 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 PDE7BQ9NP56 450 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 SDR39U1Q9NRG7 319 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 SIRT5Q9NXA8 310 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 TAGLN3Q9UI15 199 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 ADAM29Q9UKF5 820 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 CLCA2Q9UQC9 943 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 COPG1Q9Y678 874 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 CACNA1BQ00975 2339 aa13.3□□□□□ -0.28
CSNK1D-209ENST00000578904 A8MU76 341 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 ZSCAN9O15535 394 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 PRMT3O60678 531 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 SRPX2O60687 465 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 GUCY1B2O75343 617 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 CSO75390 466 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 SLC22A3O75751 556 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 UBOX5O94941 541 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 ZBTB11O95625 1053 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 RPL3P39023 403 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 BCL6P41182 706 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 MLLT3P42568 568 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 PDX1P52945 283 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 CYP4F2P78329 520 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 STX5Q13190 355 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 CYLC2Q14093 348 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 UBAP2LQ14157 1087 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 RFTN2Q52LD8 501 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 TMEM198Q66K66 360 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 NIPAL1Q6NVV3 410 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 NOXRED1Q6NXP6 359 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 TRIM40Q6P9F5 258 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 ZNF574Q6ZN55 896 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 PRSS42Q7Z5A4 293 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 B3GNT8Q7Z7M8 397 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 SLITRK4Q8IW52 837 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 METTL4Q8N3J2 472 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 ANKRD53Q8N9V6 530 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 CHTF18Q8WVB6 975 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 TRAPPC9Q96Q05 1148 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 MAP3K3Q99759 626 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 C1orf50Q9BV19 199 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 SLC25A23Q9BV35 468 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 DPY30Q9C005 99 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 REXO4Q9GZR2 422 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 SPNS1Q9H2V7 528 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 SOHLH2Q9NX45 425 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 ARMCX1Q9P291 453 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 POLR3HQ9Y535 204 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 ZFHX4Q86UP3 3567 aa13.29□□□□□ -0.28
CSNK1D-209ENST00000578904 COL27A1Q8IZC6 1860 aaPredicted RBP13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 A0A0J9YVX5 310 aa13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 GNG14A0A1W2PPG7 69 aa13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 NDUFS4O43181 175 aa13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 KIF1CO43896 1103 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 LCMT2O60294 686 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 ALDOCP09972 364 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 PIK3R1P27986 724 aa13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 TIA1P31483 386 aaKnown RBP eCLIP13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 KCNK10P57789 538 aa13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 YBX1P67809 324 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 CYP4F3Q08477 520 aa13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 BNIP1Q12981 228 aa13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 TRA2AQ13595 282 aaKnown RBP eCLIP13.28□□□□□ -0.28
CSNK1D-209ENST00000578904 KIAA0040Q15053 153 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms