RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 CXCR2P25025 360 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 PIK3CBP42338 1070 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 RELAQ04206 551 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 CSTF3Q12996 717 aaKnown RBP12.32□□□□□ -0.44
CTC1-205ENST00000578537 NR6A1Q15406 480 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 ISXQ2M1V0 245 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 LSM12Q3MHD2 195 aaKnown RBP12.32□□□□□ -0.44
CTC1-205ENST00000578537 SPATA21Q7Z572 469 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 KMT5CQ86Y97 462 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 PDSS2Q86YH6 399 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 CSNK1A1LQ8N752 337 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 MS4A6EQ96DS6 147 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 C11orf24Q96F05 449 aaPredicted RBP12.32□□□□□ -0.44
CTC1-205ENST00000578537 MAGEB10Q96LZ2 347 aaPredicted RBP12.32□□□□□ -0.44
CTC1-205ENST00000578537 TEFMQ96QE5 360 aaKnown RBP12.32□□□□□ -0.44
CTC1-205ENST00000578537 CCT8L2Q96SF2 557 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 CTRCQ99895 268 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 DPYSL5Q9BPU6 564 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 C1orf50Q9BV19 199 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 PITHD1Q9GZP4 211 aaPredicted RBP12.32□□□□□ -0.44
CTC1-205ENST00000578537 AKTIPQ9H8T0 292 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 PDE7BQ9NP56 450 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 KLHL14Q9P2G3 628 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 SLC12A4Q9UP95 1085 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 PLCL2Q9UPR0 1127 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 DLGAP4Q9Y2H0 992 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 CROCCQ5TZA2 2017 aa12.32□□□□□ -0.44
CTC1-205ENST00000578537 LRIT2A6NDA9 550 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 ANKDD1BA6NHY2 528 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 SRRM3A6NNA2 597 aaPredicted RBP12.31□□□□□ -0.44
CTC1-205ENST00000578537 EFCAB7A8K855 629 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 FOXE1O00358 373 aaPredicted RBP12.31□□□□□ -0.44
CTC1-205ENST00000578537 HGSO14964 777 aaPredicted RBP12.31□□□□□ -0.44
CTC1-205ENST00000578537 PEX11AO75192 247 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 EEDO75530 441 aaKnown RBP12.31□□□□□ -0.44
CTC1-205ENST00000578537 GBAP04062 536 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 SMIM10L1P0DMW3 83 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 ITGAXP20702 1163 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 BSGP35613 385 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 GRK3P35626 688 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 RAB8AP61006 207 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 RPL38P63173 70 aaKnown RBP12.31□□□□□ -0.44
CTC1-205ENST00000578537 E2F1Q01094 437 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 FOXC1Q12948 553 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 NAA25Q14CX7 972 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 KIAA0040Q15053 153 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 HIST2H2ACQ16777 129 aaPredicted RBP12.31□□□□□ -0.44
CTC1-205ENST00000578537 GALNTL6Q49A17 601 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 RFTN2Q52LD8 501 aaPredicted RBP12.31□□□□□ -0.44
CTC1-205ENST00000578537 WASHC2DQ5SRD0 308 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 KHDRBS2Q5VWX1 349 aaKnown RBP12.31□□□□□ -0.44
CTC1-205ENST00000578537 HIST2H2AA3Q6FI13 130 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 LARP4Q71RC2 724 aaKnown RBP eCLIP12.31□□□□□ -0.44
CTC1-205ENST00000578537 PIGWQ7Z7B1 504 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 TMEM151BQ8IW70 566 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 C1orf52Q8N6N3 182 aaKnown RBP12.31□□□□□ -0.44
CTC1-205ENST00000578537 UTP15Q8TED0 518 aaKnown RBP12.31□□□□□ -0.44
CTC1-205ENST00000578537 NUDT8Q8WV74 236 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 SLC13A3Q8WWT9 602 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 UBE2E3Q969T4 207 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 SMIM10Q96HG1 83 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 FAR2Q96K12 515 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 FCRL1Q96LA6 429 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 QRFPRQ96P65 431 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 EBPLQ9BY08 206 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 TRIM55Q9BYV6 548 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 BRF2Q9HAW0 419 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 FGF21Q9NSA1 209 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 VTI1BQ9UEU0 232 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 PPT2Q9UMR5 302 aa12.31□□□□□ -0.44
CTC1-205ENST00000578537 POLR3HQ9Y535 204 aaPredicted RBP12.31□□□□□ -0.44
CTC1-205ENST00000578537 ZNF860A6NHJ4 632 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 E9PBE3 544 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 NPIPB8E9PQR5 432 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 ERI3O43414 337 aaKnown RBP12.3□□□□□ -0.44
CTC1-205ENST00000578537 FOXS1O43638 330 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 KLHL41O60662 606 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 RSL1D1O76021 490 aaKnown RBP12.3□□□□□ -0.44
CTC1-205ENST00000578537 FAM107AO95990 144 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 CHEK2O96017 543 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 SERPINA6P08185 405 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 TROVE2P10155 538 aaKnown RBP eCLIP12.3□□□□□ -0.44
CTC1-205ENST00000578537 CEACAM1P13688 526 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 HSD3B1P14060 373 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 IL1RNP18510 177 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 SPINK2P20155 84 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 PRPH2P23942 346 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 TACR1P25103 407 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 HSD3B2P26439 372 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 TRA2AQ13595 282 aaKnown RBP eCLIP12.3□□□□□ -0.44
CTC1-205ENST00000578537 ZC3H12BQ5HYM0 836 aaKnown RBP12.3□□□□□ -0.44
CTC1-205ENST00000578537 C6orf136Q5SQH8 315 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 DEPDC1Q5TB30 811 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 TMEM214Q6NUQ4 689 aaKnown RBP12.3□□□□□ -0.44
CTC1-205ENST00000578537 COMMD6Q7Z4G1 85 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 ZFAND4Q86XD8 727 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 METTL4Q8N3J2 472 aa12.3□□□□□ -0.44
CTC1-205ENST00000578537 METTL27Q8N6F8 245 aaPredicted RBP12.3□□□□□ -0.44
CTC1-205ENST00000578537 ZNF655Q8N720 491 aaPredicted RBP12.3□□□□□ -0.44
CTC1-205ENST00000578537 CHTF18Q8WVB6 975 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms