RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CLEC4MQ9H2X3 399 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 FAM114A2Q9NRY5 505 aa9.45□□□□□ -0.9
NPLOC4-220ENST00000576940 FLNAP21333 2647 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 A0A0G2JNJ9 132 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 GRID2IPA4D2P6 1211 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 FAM166BA8MTA8 275 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 E5RI56 91 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 CHST10O43529 356 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 ZBTB14O43829 449 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 ESR1P03372 595 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 GLI4P10075 376 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 IL10P22301 178 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 DNASE1P24855 282 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 ZFP36L2P47974 494 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 CLCN7P51798 805 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 DGKQP52824 942 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 MPP1Q00013 466 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 OASLQ15646 514 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 KCTD19Q17RG1 926 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 MEI1Q5TIA1 1274 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 TMEM198Q66K66 360 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 CAPN13Q6MZZ7 669 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 C16orf47Q6ZP98 133 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 TMEM156Q8N614 296 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 PRELID2Q8N945 189 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 LRRC57Q8N9N7 239 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 WFDC11Q8NEX6 87 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 ASB11Q8WXH4 323 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 ALKBH8Q96BT7 664 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 OR1F2PQ96R84 312 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 MDFIQ99750 246 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 TTYH2Q9BSA4 534 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 LACRTQ9GZZ8 138 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 SLC24A3Q9HC58 644 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 RASSF1Q9NS23 344 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 DEPPQ9NTK1 212 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 Q9UFV3 132 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 AMFRQ9UKV5 643 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 SLC22A7Q9Y694 548 aa9.44□□□□□ -0.9
NPLOC4-220ENST00000576940 SAGE2PA6NJ88 616 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 H3BMM5 538 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 GFYI3L273 518 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 FCHO1O14526 889 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 ITGA10O75578 1167 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 MAOAP21397 527 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 HRH2P25021 359 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 MGAT1P26572 445 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 RPL22P35268 128 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 ADH7P40394 386 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 KIR2DL3P43628 341 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 NPY2RP49146 381 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 PPIAP62937 165 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 MEF2AQ02078 507 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 SNX1Q13596 522 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 RPS6KA1Q15418 735 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 DEFB134Q4QY38 66 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 RTL6Q6ICC9 239 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 MRNIPQ6NTE8 343 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 PAOXQ6QHF9 649 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 CENPUQ71F23 418 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 PEX26Q7Z412 305 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 CDC20BQ86Y33 519 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 CCDC170Q8IYT3 715 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 CYP4Z2PQ8N1L4 340 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 AFAP1L2Q8N4X5 818 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 FBXO15Q8NCQ5 510 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 ZNF740Q8NDX6 193 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 GIMAP7Q8NHV1 300 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 C1orf54Q8WWF1 131 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 THAP11Q96EK4 314 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 RMND5BQ96G75 393 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 SLC6A16Q9GZN6 736 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 ATG10Q9H0Y0 220 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 LIN28AQ9H9Z2 209 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 NECTIN3Q9NQS3 549 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 ALKBH4Q9NXW9 302 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 CRIM1Q9NZV1 1036 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 KCMF1Q9P0J7 381 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 FBXW2Q9UKT8 454 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 ZNF148Q9UQR1 794 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 MED16Q9Y2X0 877 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 FAM215AQ9Y5M1 114 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 LIPGQ9Y5X9 500 aa9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 EPN1Q9Y6I3 576 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-220ENST00000576940 TRBV11-1A0A0K0K1C0 115 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 G3V3Y1 287 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 LIASO43766 372 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 PRKNO60260 465 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 GALR3O60755 368 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 SERPIND1P05546 499 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 ACVR2AP27037 513 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 CYLC1P35663 651 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 SKIV2L2P42285 1042 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 ADARP55265 1226 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 TBPL1P62380 186 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 PLGLB1Q02325 96 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 HERC3Q15034 1050 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 XKR6Q5GH73 641 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 B3GNT6Q6ZMB0 384 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 UBE2R2Q712K3 238 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms