RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SAMD15Q9P1V8 674 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 PAK5Q9P286 719 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 MYOTQ9UBF9 498 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 ANAPC5Q9UJX4 755 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 COPG1Q9Y678 874 aaKnown RBP5.93□□□□□ -1.46
NUP88-212ENST00000576708 PIKFYVEQ9Y2I7 2098 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 LRRK2Q5S007 2527 aa5.93□□□□□ -1.46
NUP88-212ENST00000576708 SNRNP200O75643 2136 aaKnown RBP5.93□□□□□ -1.46
NUP88-212ENST00000576708 USP9YO00507 2555 aaPredicted RBP5.93□□□□□ -1.46
NUP88-212ENST00000576708 TCRBV5S2A0A599 114 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 CCDC189A1A4V9 331 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 HYKKA2RU49 373 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 ANKUB1A6NFN9 424 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 WIPF3A6NGB9 483 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 F8W8V4 182 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 KDM1AO60341 852 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 AVILO75366 819 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 KLHL18O94889 574 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 VAPBO95292 243 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 ONECUT2O95948 504 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 F10P00742 488 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 LDLRP01130 860 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 STATHP02808 62 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 AMY2AP04746 511 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 RPN2P04844 631 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 ALPPP05187 535 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 CELA2AP08217 269 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 CD63P08962 238 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 AMY2BP19961 511 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 TTPAP49638 278 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 VPS41P49754 854 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 SOX8P57073 446 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 KLC1Q07866 573 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 AIMP2Q13155 320 aaKnown RBP5.92□□□□□ -1.46
NUP88-212ENST00000576708 TSTA3Q13630 321 aaPredicted RBP5.92□□□□□ -1.46
NUP88-212ENST00000576708 GRM7Q14831 915 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 TMED2Q15363 201 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 RPS6KA1Q15418 735 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 RBBP7Q16576 425 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 CCNG2Q16589 344 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 ACSBG2Q5FVE4 666 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 VWA2Q5GFL6 755 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.92□□□□□ -1.46
NUP88-212ENST00000576708 AARS2Q5JTZ9 985 aaKnown RBP5.92□□□□□ -1.46
NUP88-212ENST00000576708 FAAH2Q6GMR7 532 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 FBXO42Q6P3S6 717 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 TTC23LQ6PF05 361 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 SUSD1Q6UWL2 747 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 GSTA5Q7RTV2 222 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 OTOAQ7RTW8 1153 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 RNF10Q8N5U6 811 aaKnown RBP5.92□□□□□ -1.46
NUP88-212ENST00000576708 TTC29Q8NA56 475 aaPredicted RBP5.92□□□□□ -1.46
NUP88-212ENST00000576708 PPFIBP2Q8ND30 876 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 OR2L3Q8NG85 312 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 OR11G2Q8NGC1 345 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 OR2A1Q8NGT9 310 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 GSDMBQ8TAX9 411 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 DNAJB14Q8TBM8 379 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 STT3BQ8TCJ2 826 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 MZB1Q8WU39 189 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 LPGAT1Q92604 370 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 DLG3Q92796 817 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 ZUFSPQ96AP4 578 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 FKBP10Q96AY3 582 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 RAD51AP1Q96B01 352 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 SLC22A18Q96BI1 424 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 THOC3Q96J01 351 aaKnown RBP5.92□□□□□ -1.46
NUP88-212ENST00000576708 CNDP1Q96KN2 507 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 C10orf90Q96M02 699 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 ZNF285Q96NJ3 590 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 BIRC8Q96P09 236 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 SYT3Q9BQG1 590 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 DPH7Q9BTV6 452 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 CRB3Q9BUF7 120 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 FRMD8P1Q9BZ68 369 aaPredicted RBP5.92□□□□□ -1.46
NUP88-212ENST00000576708 ZNF160Q9HCG1 818 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 ZNF304Q9HCX3 659 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 LZTFL1Q9NQ48 299 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 ABCF3Q9NUQ8 709 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 INTS7Q9NVH2 962 aaKnown RBP5.92□□□□□ -1.46
NUP88-212ENST00000576708 PLA2G3Q9NZ20 509 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 ASH2LQ9UBL3 628 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 GNPTGQ9UJJ9 305 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 CRYL1Q9Y2S2 319 aa5.92□□□□□ -1.46
NUP88-212ENST00000576708 IGKV1-8A0A0C4DH67 115 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 VSTM2BA6NLU5 285 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 ARHGEF33A8MVX0 844 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 TARM1B6A8C7 271 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 H0YGG7 62 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 E2F3O00716 465 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 GSTA4O15217 222 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 IPO13O94829 963 aaKnown RBP5.91□□□□□ -1.46
NUP88-212ENST00000576708 DDAH2O95865 285 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 IGHEP01854 428 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 FGGP02679 453 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 PIM1P11309 404 aaPredicted RBP5.91□□□□□ -1.46
NUP88-212ENST00000576708 CHRM3P20309 590 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 RPS3P23396 243 aaKnown RBP eCLIP5.91□□□□□ -1.46
NUP88-212ENST00000576708 CXCR5P32302 372 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 PPARGP37231 505 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms