RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CRKLP46109 303 aaKnown RBP3.79□□□□□ -1.8
CDC27-216ENST00000574304 ZFP36L2P47974 494 aaKnown RBP3.79□□□□□ -1.8
CDC27-216ENST00000574304 NPY4RP50391 375 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 PEX6Q13608 980 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 UPP1Q16831 310 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 SPANXN4Q5MJ08 99 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 FAM182AQ5T1J6 154 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 MACC1Q6ZN28 852 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 GPR141Q7Z602 305 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 OR4N5Q8IXE1 308 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 CCDC185Q8N715 623 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 Q8NFD4 153 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 OR5M9Q8NGP3 310 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 SPPL2AQ8TCT8 520 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 HEXDCQ8WVB3 486 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 LURAP1Q96LR2 239 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 AK8Q96MA6 479 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 PSMB7Q99436 277 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 MGME1Q9BQP7 344 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 ALKBH7Q9BT30 221 aaPredicted RBP3.79□□□□□ -1.8
CDC27-216ENST00000574304 C10orf88Q9H8K7 445 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 PFDN4Q9NQP4 134 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 FAM120CQ9NX05 1096 aaKnown RBP3.79□□□□□ -1.8
CDC27-216ENST00000574304 KLK11Q9UBX7 282 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 CFDP1Q9UEE9 299 aaPredicted RBP3.79□□□□□ -1.8
CDC27-216ENST00000574304 TP53TG3Q9ULZ0 132 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 NSG2Q9Y328 171 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 MRPS18CQ9Y3D5 142 aaKnown RBP3.79□□□□□ -1.8
CDC27-216ENST00000574304 SPATA31D1Q6ZQQ2 1576 aa3.79□□□□□ -1.8
CDC27-216ENST00000574304 FLRT2O43155 660 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 PPIP5K2O43314 1243 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 C9P02748 559 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 NAGLUP54802 743 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 ZNF542PQ5EBM4 170 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 Q6ZR54 194 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 TIPARPQ7Z3E1 657 aaKnown RBP3.78□□□□□ -1.8
CDC27-216ENST00000574304 COX8CQ7Z4L0 72 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 HPS6Q86YV9 775 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 TEX26Q8N6G2 289 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.78□□□□□ -1.8
CDC27-216ENST00000574304 OCC1Q8TAD7 63 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 SIPA1Q96FS4 1042 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 PAPOLGQ9BWT3 736 aaKnown RBP3.78□□□□□ -1.8
CDC27-216ENST00000574304 JPT2Q9H910 190 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 RPF1Q9H9Y2 349 aaKnown RBP3.78□□□□□ -1.8
CDC27-216ENST00000574304 PRR34Q9NV39 138 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 GPR83Q9NYM4 423 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 ANAPC5Q9UJX4 755 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 KLK4Q9Y5K2 254 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 STYXL1Q9Y6J8 313 aa3.78□□□□□ -1.8
CDC27-216ENST00000574304 ARHGEF33A8MVX0 844 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 FAM86B1E9PN63 330 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 NPIPA3F8WFD2 350 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 GALR3O60755 368 aaPredicted RBP3.77□□□□□ -1.81
CDC27-216ENST00000574304 DKC1O60832 514 aaKnown RBP eCLIP3.77□□□□□ -1.81
CDC27-216ENST00000574304 FCGR3BO75015 233 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 LRCH4O75427 683 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 MT-ND2P03891 347 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 GBAP04062 536 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 FAM86B2P0C5J1 330 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 LBPP18428 481 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 ATP4BP51164 291 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 NDUFV3P56181 108 aaKnown RBP3.77□□□□□ -1.81
CDC27-216ENST00000574304 BTG1P62324 171 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 GRB14Q14449 540 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 KCTD2Q14681 263 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 C15orf32Q32M92 178 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 FAM91A1Q658Y4 838 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 TRMT11Q7Z4G4 463 aaKnown RBP3.77□□□□□ -1.81
CDC27-216ENST00000574304 SPATA21Q7Z572 469 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 DND1Q8IYX4 353 aaKnown RBP3.77□□□□□ -1.81
CDC27-216ENST00000574304 NCOA7Q8NI08 942 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 RAB3IPQ96QF0 476 aaPredicted RBP3.77□□□□□ -1.81
CDC27-216ENST00000574304 SERINC2Q96SA4 455 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 FERMT1Q9BQL6 677 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 PILRAQ9UKJ1 303 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 SATB2Q9UPW6 733 aa3.77□□□□□ -1.81
CDC27-216ENST00000574304 SIGLEC5O15389 551 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 TNFSF12O43508 249 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 MOCS2O96007 188 aaPredicted RBP3.76□□□□□ -1.81
CDC27-216ENST00000574304 ADORA3P0DMS8 318 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 EEF2P13639 858 aaKnown RBP3.76□□□□□ -1.81
CDC27-216ENST00000574304 GOT1P17174 413 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 ADRA2CP18825 462 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 BCL3P20749 454 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 PSMB4P28070 264 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 FEN1P39748 380 aaKnown RBP3.76□□□□□ -1.81
CDC27-216ENST00000574304 OR3A3P47888 321 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 PTENP60484 403 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 SPOUT1Q5T280 376 aaKnown RBP3.76□□□□□ -1.81
CDC27-216ENST00000574304 FAM46CQ5VWP2 391 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 SHEQ5VZ18 495 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 TXNRD3NBQ6F5E7 133 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 TMEM182Q6ZP80 229 aaPredicted RBP3.76□□□□□ -1.81
CDC27-216ENST00000574304 SLFN11Q7Z7L1 901 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 PHLDB2Q86SQ0 1253 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 CATSPER3Q86XQ3 398 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 ZC3H3Q8IXZ2 948 aaKnown RBP3.76□□□□□ -1.81
CDC27-216ENST00000574304 TIGD4Q8IY51 512 aa3.76□□□□□ -1.81
CDC27-216ENST00000574304 FBXL16Q8N461 479 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms