RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 KLC1Q07866 573 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 AIMP2Q13155 320 aaKnown RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 FAM53BQ14153 422 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 MYBPC3Q14896 1274 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 FASTKD3Q14CZ7 662 aaKnown RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 RBBP7Q16576 425 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 NDUFA9Q16795 377 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 PHKG1Q16816 387 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 PRAMEF13Q5VWM6 474 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 DUPD1Q68J44 220 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 CAPN13Q6MZZ7 669 aaPredicted RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 JMJD6Q6NYC1 403 aaPredicted RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 KIRREL2Q6UWL6 708 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 LCTLQ6UWM7 567 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 MBOAT1Q6ZNC8 495 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 C3orf62Q6ZUJ4 267 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 SLC26A11Q86WA9 606 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 ZC3HC1Q86WB0 502 aaKnown RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 C17orf64Q86WR6 236 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 C17orf53Q8N3J3 647 aaPredicted RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 NKAPQ8N5F7 415 aaKnown RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 ATL1Q8WXF7 558 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 MMABQ96EY8 250 aaPredicted RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 C10orf90Q96M02 699 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 OLFM1Q99784 485 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 HAUS8Q9BT25 410 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 CRB3Q9BUF7 120 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 MRPL18Q9H0U6 180 aaKnown RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 ZNF552Q9H707 407 aaPredicted RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 SYNPO2LQ9H987 977 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 NSMCE4AQ9NXX6 385 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 TRPC4Q9UBN4 977 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 CTSFQ9UBX1 484 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 HIF3AQ9Y2N7 669 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 UTP11Q9Y3A2 253 aaKnown RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 PSAT1Q9Y617 370 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 HS3ST3B1Q9Y662 390 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 TNRC6AQ8NDV7 1962 aaKnown RBP7.06□□□□□ -1.28
NUP88-205ENST00000572809 SPTA1P02549 2419 aa7.06□□□□□ -1.28
NUP88-205ENST00000572809 FER1L5A0AVI2 2057 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 PCSK5Q92824 1860 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 A0A0A6YYC8 382 aaPredicted RBP7.05□□□□□ -1.28
NUP88-205ENST00000572809 FAM95CA0A1B0GW59 222 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 FEZF1A0PJY2 475 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 I3L1I5 382 aaPredicted RBP7.05□□□□□ -1.28
NUP88-205ENST00000572809 FOXS1O43638 330 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 LCMT2O60294 686 aaKnown RBP7.05□□□□□ -1.28
NUP88-205ENST00000572809 IPO13O94829 963 aaKnown RBP7.05□□□□□ -1.28
NUP88-205ENST00000572809 ALPPP05187 535 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 ANXA5P08758 320 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 ENO2P09104 434 aaPredicted RBP7.05□□□□□ -1.28
NUP88-205ENST00000572809 CXCR2P25025 360 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 SSTR1P30872 391 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 GRK3P35626 688 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 AVPR1BP47901 424 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 EMP2P54851 167 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 PLTPP55058 493 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 TAS2R39P59534 338 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 CAV1Q03135 178 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 C2orf54Q08AI8 447 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 ILF2Q12905 390 aaKnown RBP7.05□□□□□ -1.28
NUP88-205ENST00000572809 ZXDCQ2QGD7 858 aaPredicted RBP7.05□□□□□ -1.28
NUP88-205ENST00000572809 TUBB8Q3ZCM7 444 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 VWA5B1Q5TIE3 1220 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 ATG9BQ674R7 924 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 TMEM207Q6UWW9 146 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 IGFL3Q6UXB1 125 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 CYS1Q717R9 158 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 PRSS58Q8IYP2 241 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 ZADH2Q8N4Q0 377 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 ARHGEF39Q8N4T4 335 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 RBMXL3Q8N7X1 1067 aaKnown RBP7.05□□□□□ -1.28
NUP88-205ENST00000572809 KCT2Q8NC54 265 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 CAMKVQ8NCB2 501 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 OR11G2Q8NGC1 345 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 OR56A3Q8NH54 315 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 CPT1CQ8TCG5 803 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 UBASH3BQ8TF42 649 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 SLC13A3Q8WWT9 602 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 ANKRD7Q92527 254 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 CDKL2Q92772 493 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 MIB2Q96AX9 1013 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 PYCR2Q96C36 320 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 FBXL8Q96CD0 374 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 TM4SF19Q96DZ7 209 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 VPS39Q96JC1 886 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 SGPP1Q9BX95 441 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 TMPRSS13Q9BYE2 586 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 FAM129AQ9BZQ8 928 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 DRC3Q9H069 523 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 SAYSD1Q9NPB0 183 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 MKKSQ9NPJ1 570 aaPredicted RBP7.05□□□□□ -1.28
NUP88-205ENST00000572809 SLAMF7Q9NQ25 335 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 CRIM1Q9NZV1 1036 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 C3orf18Q9UK00 162 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 FBXL4Q9UKA2 621 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 PLAAQ9Y263 795 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 MTO1Q9Y2Z2 717 aaKnown RBP7.05□□□□□ -1.28
NUP88-205ENST00000572809 ANKRD12Q6UB98 2062 aa7.05□□□□□ -1.28
NUP88-205ENST00000572809 HEATR5BQ9P2D3 2071 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms