RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ACTR8Q9H981 624 aa15□□□□□ -0.01
CHD3-215ENST00000572750 ROPN1Q9HAT0 212 aaPredicted RBP15□□□□□ -0.01
CHD3-215ENST00000572750 HCN3Q9P1Z3 774 aa15□□□□□ -0.01
CHD3-215ENST00000572750 COPG2Q9UBF2 871 aa15□□□□□ -0.01
CHD3-215ENST00000572750 DCDC2Q9UHG0 476 aa15□□□□□ -0.01
CHD3-215ENST00000572750 COPEO14579 308 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 OR7A17O14581 309 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 PRPF4O43172 522 aaKnown RBP eCLIP14.99□□□□□ -0.01
CHD3-215ENST00000572750 DLX3O60479 287 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 RDH16O75452 317 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 WFS1O76024 890 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 KLHL18O94889 574 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 NSA2O95478 260 aaKnown RBP14.99□□□□□ -0.01
CHD3-215ENST00000572750 ONECUT2O95948 504 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 PROCP04070 461 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 PIM1P11309 404 aaPredicted RBP14.99□□□□□ -0.01
CHD3-215ENST00000572750 PCNAP12004 261 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 OTX2P32243 289 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 AVPR1BP47901 424 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 E2F2Q14209 437 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 NKG7Q16617 165 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 UGT8Q16880 541 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 DEFB134Q4QY38 66 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 TOR1AIP1Q5JTV8 583 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 GRHL2Q6ISB3 625 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 PRSS58Q8IYP2 241 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 SHISA5Q8N114 240 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 TRPV3Q8NET8 790 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 OR52B6Q8NGF0 335 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 OR2Y1Q8NGV0 311 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 EXTL1Q92935 676 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 APOPT1Q96IL0 206 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 ZIM3Q96PE6 472 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 CDK15Q96Q40 435 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 SPSB2Q99619 263 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 YIPF2Q9BWQ6 316 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 PITHD1Q9GZP4 211 aaPredicted RBP14.99□□□□□ -0.01
CHD3-215ENST00000572750 AICDAQ9GZX7 198 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 KLHL31Q9H511 634 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 NOL11Q9H8H0 719 aaKnown RBP14.99□□□□□ -0.01
CHD3-215ENST00000572750 WDR54Q9H977 334 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 ANKHQ9HCJ1 492 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 SEMA4BQ9NPR2 832 aaPredicted RBP14.99□□□□□ -0.01
CHD3-215ENST00000572750 TRPC4Q9UBN4 977 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 ZNF490Q9ULM2 529 aaPredicted RBP14.99□□□□□ -0.01
CHD3-215ENST00000572750 CDC14AQ9UNH5 594 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 NAALAD2Q9Y3Q0 740 aa14.99□□□□□ -0.01
CHD3-215ENST00000572750 CCDC151A5D8V7 595 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 ERLIN1O75477 346 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 TBX6O95947 436 aaPredicted RBP14.98□□□□□ -0.01
CHD3-215ENST00000572750 UMODP07911 640 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 SERPINA6P08185 405 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 TSPAN8P19075 237 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 ATP5F1P24539 256 aaPredicted RBP14.98□□□□□ -0.01
CHD3-215ENST00000572750 HNRNPH1P31943 449 aaKnown RBP14.98□□□□□ -0.01
CHD3-215ENST00000572750 CRHR1P34998 444 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 CASP2P42575 452 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 RAB8AP61006 207 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 HERVK_113P63132 956 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 RHDQ02161 417 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 SLC18A2Q05940 514 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 LAPTM5Q13571 262 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 DEFB109BQ30KR1 87 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 CRTC2Q53ET0 693 aaPredicted RBP14.98□□□□□ -0.01
CHD3-215ENST00000572750 VWA2Q5GFL6 755 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 FAM219BQ5XKK7 198 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 METTL2BQ6P1Q9 378 aaKnown RBP14.98□□□□□ -0.01
CHD3-215ENST00000572750 MED27Q6P2C8 311 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 ABHD13Q7L211 337 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 AFAP1L2Q8N4X5 818 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 TTLQ8NG68 377 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 ADAMTS17Q8TE56 1095 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 UTP15Q8TED0 518 aaKnown RBP14.98□□□□□ -0.01
CHD3-215ENST00000572750 ZNF483Q8TF39 744 aaPredicted RBP14.98□□□□□ -0.01
CHD3-215ENST00000572750 TMEM109Q9BVC6 243 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 ERVK-6Q9BXR3 956 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 FAM117AQ9C073 453 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 SLC26A1Q9H2B4 701 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 NT5DC2Q9H857 520 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 ZBTB26Q9HCK0 441 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 PRM3Q9NNZ6 103 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 ZNF282Q9UDV7 671 aaPredicted RBP14.98□□□□□ -0.01
CHD3-215ENST00000572750 RNF11Q9Y3C5 154 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 MAP4K5Q9Y4K4 846 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 SLC22A7Q9Y694 548 aa14.98□□□□□ -0.01
CHD3-215ENST00000572750 TLN1Q9Y490 2541 aaKnown RBP14.98□□□□□ -0.01
CHD3-215ENST00000572750 A0A0G2JN53 185 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 A0A1B0GTL3 188 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 ANKDD1BA6NHY2 528 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 G3V2L1 256 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 H0YIG0 161 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 PLIN3O60664 434 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 CLEC3AO75596 197 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 ALBP02768 609 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 MYL2P10916 166 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 ALOX12P18054 663 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 GSTM2P28161 218 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 CCT5P48643 541 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 CCNG1P51959 295 aa14.97□□□□□ -0.01
CHD3-215ENST00000572750 CDH13P55290 713 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms