RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CADM3Q8N126 398 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 KDM1BQ8NB78 822 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 APOBEC4Q8WW27 367 aaKnown RBP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 INTS12Q96CB8 462 aaKnown RBP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 MSI2Q96DH6 328 aaKnown RBP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 RSRC1Q96IZ7 334 aaKnown RBP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 CEP295NLQ96MC4 621 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 CTRCQ99895 268 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 TUBB2BQ9BVA1 445 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 TIPINQ9BVW5 301 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 SLC2A11Q9BYW1 496 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 LRRN3Q9H3W5 708 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 MRPL44Q9H9J2 332 aaKnown RBP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 EIF2B3Q9NR50 452 aaKnown RBP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 SPATS2LQ9NUQ6 558 aaKnown RBP5.21□□□□□ -1.58
SF3B3-214ENST00000572365 TMEM184CQ9NVA4 438 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 SCML1Q9UN30 329 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 ZNF510Q9Y2H8 683 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 LYVE1Q9Y5Y7 322 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 CAPN7Q9Y6W3 813 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 ANKRD36A6QL64 1941 aa5.21□□□□□ -1.58
SF3B3-214ENST00000572365 PCSK5Q92824 1860 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 A0A096LPK6 155 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 EDDM13A0A1B0GTR0 161 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 LIPT2A6NK58 231 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 GTPBP1O00178 669 aaKnown RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 CLIC2O15247 247 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 POLR3GO15318 223 aaPredicted RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 PLRG1O43660 514 aaKnown RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 PAGE4O60829 102 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 TBCAO75347 108 aaKnown RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 ERLIN1O75477 346 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 SEC31AO94979 1220 aaKnown RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 GCNT3O95395 438 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 CSF2P04141 144 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 MYZAPP0CAP1 466 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 FGF3P11487 239 aaPredicted RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 CDH2P19022 906 aaPredicted RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 EDN2P20800 178 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 F8A1P23610 371 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 AKT2P31751 481 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 TNFSF8P32971 234 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 RWDD2BP57060 319 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 ECT2LQ008S8 904 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 CDC20Q12834 499 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 CHAF1BQ13112 559 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 INPP5JQ15735 1006 aaPredicted RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 HIST2H2ACQ16777 129 aaPredicted RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 DNAJC21Q5F1R6 531 aaKnown RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 C6orf10Q5SRN2 563 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 SPOPLQ6IQ16 392 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 SYT10Q6XYQ8 523 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 GBP6Q6ZN66 633 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 CLEC20AQ6ZU45 233 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 Q71RC1 249 aaPredicted RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 TBC1D26Q86UD7 250 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 CNGA4Q8IV77 575 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 APLFQ8IW19 511 aaPredicted RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 MFN1Q8IWA4 741 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 LRRC57Q8N9N7 239 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 TMEM116Q8NCL8 245 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 RASSF8Q8NHQ8 419 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 WFIKKN2Q8TEU8 576 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 WASF1Q92558 559 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 ART4Q93070 314 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 TSACCQ96A04 125 aaPredicted RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 FAM149B1Q96BN6 582 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 LMLNQ96KR4 655 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 LURAP1Q96LR2 239 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 RANBP9Q96S59 729 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 DCLK3Q9C098 648 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 TMPRSS5Q9H3S3 457 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 GPN2Q9H9Y4 310 aaPredicted RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 SCPEP1Q9HB40 452 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 BATF3Q9NR55 127 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 SEPT11Q9NVA2 429 aaKnown RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 OCIAD1Q9NX40 245 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 MSRB1Q9NZV6 116 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 CPSF2Q9P2I0 782 aaKnown RBP5.2□□□□□ -1.58
SF3B3-214ENST00000572365 MYO6Q9UM54 1294 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 CARD8Q9Y2G2 431 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 RAP2CQ9Y3L5 183 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 AKAP6Q13023 2319 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 VPS13CQ709C8 3753 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 ATP8B3O60423 1300 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 SPTBP11277 2137 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 JMJD1CQ15652 2540 aa5.2□□□□□ -1.58
SF3B3-214ENST00000572365 SPTY2D1-AS1A0A0U1RR47 76 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 GOLGA6L9A6NEM1 432 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 CGB1A6NKQ9 187 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 LRRC53A6NM62 1247 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 A8MU76 341 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 PRSS44E7EML9 344 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 STMND1H3BQB6 276 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 MASP2O00187 686 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 KPNA3O00505 521 aaPredicted RBP5.19□□□□□ -1.58
SF3B3-214ENST00000572365 HSPB6O14558 160 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 SLC25A17O43808 307 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 RAD1O60671 282 aa5.19□□□□□ -1.58
SF3B3-214ENST00000572365 LUC7L3O95232 432 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms