RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 AQP7O14520 342 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 KPNA5O15131 536 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 KIF5CO60282 957 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 STK10O94804 968 aaKnown RBP9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 HRGP04196 525 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 GYPCP04921 128 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 FHP07954 510 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 CELA3AP09093 270 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 BMP5P22003 454 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 IL10P22301 178 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 CTNNA2P26232 953 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 MAGEA5P43359 124 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 PNLIPRP1P54315 467 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 EIF3EP60228 445 aaKnown RBP9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 BTG2P78543 158 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 ABATP80404 500 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 ARHGAP19Q14CB8 494 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 PARP6Q2NL67 630 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 TSTD2Q5T7W7 516 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 CCDC181Q5TID7 509 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 DARS2Q6PI48 645 aaKnown RBP9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 POMZP3Q6PJE2 187 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 SLC22A16Q86VW1 577 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 SLC13A5Q86YT5 568 aaPredicted RBP9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 TMEM251Q8N6I4 163 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 APCDD1LQ8NCL9 501 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 NAXEQ8NCW5 288 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 TM4SF19Q96DZ7 209 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 LRRC46Q96FV0 321 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 PANX3Q96QZ0 392 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 PKP4Q99569 1192 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 P2RY12Q9H244 342 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 GOLPH3Q9H4A6 298 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 LMBRD1Q9NUN5 540 aa9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 MARCH4Q9P2E8 410 aaPredicted RBP9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 DRG1Q9Y295 367 aaKnown RBP9.7□□□□□ -0.86
CTDNEP1-202ENST00000570380 TRBV11-1A0A0K0K1C0 115 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 HSPB2A8KAH6 182 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 A8MUA0 341 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 E7ENX8 843 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 G3V3Y1 287 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 SMAPO00193 183 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 DVL2O14641 736 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 SUSD5O60279 629 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 SMPD2O60906 423 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 B4GALT2O60909 372 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 SLC16A8O95907 504 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 SERPINC1P01008 464 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 PPARGP37231 505 aaPredicted RBP9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 TAP2Q03519 686 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 ACVR1Q04771 509 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 CBLBQ13191 982 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 GBX1Q14549 363 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 HSPB2Q16082 182 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 WLSQ5T9L3 541 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 NDUFAF5Q5TEU4 345 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 HMBOX1Q6NT76 420 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 PRSS57Q6UWY2 283 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 YTHDF3Q7Z739 585 aaKnown RBP9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 LRRC56Q8IYG6 542 aaPredicted RBP9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 FAM109AQ8N4B1 249 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 OR52K1Q8NGK4 314 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 ZNF480Q8WV37 535 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 SARAFQ96BY9 339 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 TBC1D20Q96BZ9 403 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 MRFAP1L1Q96HT8 127 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 PTCHD1Q96NR3 888 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 EBNA1BP2Q99848 306 aaKnown RBP9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 BPIFA3Q9BQP9 254 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 TRMT1Q9NXH9 659 aaKnown RBP9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 FOXD3Q9UJU5 478 aaPredicted RBP9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 ZNF223Q9UK11 482 aaPredicted RBP9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 FBXW2Q9UKT8 454 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 ERVK-11Q9UQG0 969 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 VPS9D1Q9Y2B5 631 aa9.69□□□□□ -0.86
CTDNEP1-202ENST00000570380 ATP6AP2A0A1C7CYW4 349 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 MACROD2A1Z1Q3 448 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 SMTNL1A8MU46 457 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 PSIP1O75475 530 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 ATP6AP2O75787 350 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 GOSR1O95249 250 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 GABRA1P14867 456 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 ENDOUP21128 410 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 MAN2A2P49641 1150 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 SSR4P51571 173 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 CLCN2P51788 898 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 RPS15AP62244 130 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 OLR1P78380 273 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 MEF2AQ02078 507 aaPredicted RBP9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 HYAL2Q12891 473 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 TCEAL1Q15170 157 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 CATSPEREQ5SY80 951 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 SLC26A11Q86WA9 606 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 CAMKVQ8NCB2 501 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 B3GNT7Q8NFL0 401 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 TNIP2Q8NFZ5 429 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 KRT35Q92764 455 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 KIAA1191Q96A73 305 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 PIP5K1AQ99755 562 aa9.68□□□□□ -0.86
CTDNEP1-202ENST00000570380 YIPF4Q9BSR8 244 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms