RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 WISP3O95389 354 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 CYC1P08574 325 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 SMIM10L1P0DMW3 83 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 GRNP28799 593 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 GMPRP36959 345 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 CD96P40200 585 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 AP1S2P56377 157 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 BTG2P78543 158 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 USP10Q14694 798 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 ABHD17BQ5VST6 288 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 FAM45BPQ6NSW5 357 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 MAATS1Q7Z4T9 603 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 ZNF227Q86WZ6 799 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 BBOF1Q8ND07 529 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 NT5CQ8TCD5 201 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 FAM45AQ8TCE6 357 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 SLC5A11Q8WWX8 675 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 LRRC39Q96DD0 335 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 PDLIM5Q96HC4 596 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 SMIM10Q96HG1 83 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 TRIM31Q9BZY9 425 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 MMP25Q9NPA2 562 aa13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 PPANQ9NQ55 473 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-211ENST00000569653 EML6Q6ZMW3 1958 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 FAM187AA6NFU0 413 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 MAGEB17A8MXT2 336 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 E7ESA3 106 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 FAM227AF5H4B4 570 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 PRAMEF4O60810 478 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 TBX6O95947 436 aaPredicted RBP13□□□□□ -0.33
GTF3C1-211ENST00000569653 FHP07954 510 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 HIST1H2AGP0C0S8 130 aaPredicted RBP13□□□□□ -0.33
GTF3C1-211ENST00000569653 SLC35G6P0C7Q6 338 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 ICAM2P13598 275 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 ALOX12P18054 663 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 HIST1H2ADP20671 130 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 HNF4AP41235 474 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 RPL21P46778 160 aaKnown RBP13□□□□□ -0.33
GTF3C1-211ENST00000569653 ARL4CP56559 192 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 SLC26A5P58743 744 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 RAB8AP61006 207 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 PWP1Q13610 501 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 FRG1Q14331 258 aaKnown RBP13□□□□□ -0.33
GTF3C1-211ENST00000569653 NSDHLQ15738 373 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 ZNF766Q5HY98 468 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 PRAMEF9Q5VWM5 478 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 STRA8Q7Z7C7 330 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 THOC6Q86W42 341 aaKnown RBP13□□□□□ -0.33
GTF3C1-211ENST00000569653 PALM2Q8IXS6 379 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 CREB3L4Q8TEY5 395 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 ITLN2Q8WWU7 325 aaPredicted RBP13□□□□□ -0.33
GTF3C1-211ENST00000569653 TBC1D20Q96BZ9 403 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 HIST1H2AHQ96KK5 128 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 OR1F2PQ96R84 312 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 HIST1H2AJQ99878 128 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 H2AFJQ9BTM1 129 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 UNKQ9C0B0 810 aaKnown RBP13□□□□□ -0.33
GTF3C1-211ENST00000569653 SLC6A16Q9GZN6 736 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 KCNK13Q9HB14 408 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 MOCS1Q9NZB8 636 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 ZFP69BQ9UJL9 534 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 CORO1CQ9ULV4 474 aaPredicted RBP13□□□□□ -0.33
GTF3C1-211ENST00000569653 SLC22A14Q9Y267 594 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 CLDN16Q9Y5I7 305 aa13□□□□□ -0.33
GTF3C1-211ENST00000569653 POLQO75417 2590 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 IGKV3D-11A0A0A0MRZ8 115 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 FAM95CA0A1B0GW59 222 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 TGFBR3LH3BV60 316 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 B4GALT2O60909 372 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 NEURL1O76050 574 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 RASAL1O95294 804 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 C1QAP02745 245 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 SERPIND1P05546 499 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 UQCRHP07919 91 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 ENO2P09104 434 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 MAOAP21397 527 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 SAT1P21673 171 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 GDF5P43026 501 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 AGTR2P50052 363 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 CKAP4Q07065 602 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 C2orf54Q08AI8 447 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 MGAT5Q09328 741 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 CALCOCO2Q13137 446 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 HERC3Q15034 1050 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 CDSNQ15517 529 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 TSNQ15631 228 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 RNFT1Q5M7Z0 435 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 SPINK14Q6IE38 97 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 ADNP2Q6IQ32 1131 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 NXPE4Q6UWF7 544 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 GFRALQ6UXV0 394 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 TMPRSS11BQ86T26 416 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 TICAM1Q8IUC6 712 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 CHERPQ8IWX8 916 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 FBXO36Q8NEA4 188 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 NFAM1Q8NET5 270 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 M1APQ8TC57 530 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 ELP5Q8TE02 316 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 SCMH1Q96GD3 660 aa12.99□□□□□ -0.33
GTF3C1-211ENST00000569653 CCDC120Q96HB5 630 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms