RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 GSTM2P28161 218 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 HPDP32754 393 aaPredicted RBP12.14□□□□□ -0.47
CDT1-203ENST00000569140 XCR1P46094 333 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 PLA2G16P53816 162 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 CDH13P55290 713 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 POLE2P56282 527 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 BTN3A2P78410 334 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 LY6DQ14210 128 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 RASA2Q15283 850 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 TBCCQ15814 346 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 CCDC153Q494R4 210 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 MINDY4Q4G0A6 757 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 CRTC2Q53ET0 693 aaPredicted RBP12.14□□□□□ -0.47
CDT1-203ENST00000569140 CEP85LQ5SZL2 805 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 CPZQ66K79 652 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 TRIM40Q6P9F5 258 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 MRGPREQ86SM8 312 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 PDSS2Q86YH6 399 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 SLC22A9Q8IVM8 553 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 TMEM151BQ8IW70 566 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 ARHGEF39Q8N4T4 335 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 CCNYL1Q8N7R7 359 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 OR5T3Q8NGG3 340 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 OR51Q1Q8NH59 317 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 CREB3L4Q8TEY5 395 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 TTC9Q92623 222 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 GAL3ST3Q96A11 431 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 REPS1Q96D71 796 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 WDR34Q96EX3 536 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 PEX11GQ96HA9 241 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 SMC6Q96SB8 1091 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 SPSB2Q99619 263 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 SLC6A16Q9GZN6 736 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 REXO4Q9GZR2 422 aaKnown RBP12.14□□□□□ -0.47
CDT1-203ENST00000569140 SLC26A1Q9H2B4 701 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 C12orf65Q9H3J6 166 aaKnown RBP12.14□□□□□ -0.47
CDT1-203ENST00000569140 RRAGDQ9NQL2 400 aaPredicted RBP12.14□□□□□ -0.47
CDT1-203ENST00000569140 C14orf105Q9NVL8 296 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 C3orf18Q9UK00 162 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 MKL2Q9ULH7 1088 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 GRID1Q9ULK0 1009 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 ZNF490Q9ULM2 529 aaPredicted RBP12.14□□□□□ -0.47
CDT1-203ENST00000569140 RNF11Q9Y3C5 154 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 SLC22A7Q9Y694 548 aa12.14□□□□□ -0.47
CDT1-203ENST00000569140 ANKRD11Q6UB99 2663 aaPredicted RBP12.14□□□□□ -0.47
CDT1-203ENST00000569140 A0A088AWK7 358 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 PSMD12O00232 456 aaPredicted RBP12.13□□□□□ -0.47
CDT1-203ENST00000569140 OR7A17O14581 309 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 DLX3O60479 287 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 GALR3O60755 368 aaPredicted RBP12.13□□□□□ -0.47
CDT1-203ENST00000569140 SPAG7O75391 227 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 JRKO75564 520 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 CLEC3AO75596 197 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 DNAJB5O75953 348 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 CLDN9O95484 217 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 TGFB1P01137 390 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 RPS17P08708 135 aaKnown RBP12.13□□□□□ -0.47
CDT1-203ENST00000569140 ZNF10P21506 573 aaPredicted RBP12.13□□□□□ -0.47
CDT1-203ENST00000569140 HNRNPH1P31943 449 aaKnown RBP12.13□□□□□ -0.47
CDT1-203ENST00000569140 RAP1GDS1P52306 607 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 EMP2P54851 167 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 HERVK_113P63132 956 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 TGM3Q08188 693 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 LINC00303Q3SY05 128 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 LIPJQ5W064 366 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 NIPAL1Q6NVV3 410 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 METTL2BQ6P1Q9 378 aaKnown RBP12.13□□□□□ -0.47
CDT1-203ENST00000569140 MILR1Q7Z6M3 343 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 ZC3H7AQ8IWR0 971 aaKnown RBP12.13□□□□□ -0.47
CDT1-203ENST00000569140 OR52B6Q8NGF0 335 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 TRPC4APQ8TEL6 797 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 MTFMTQ96DP5 389 aaKnown RBP12.13□□□□□ -0.47
CDT1-203ENST00000569140 APOPT1Q96IL0 206 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 TMEM237Q96Q45 408 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 F2RL3Q96RI0 385 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 MTERF1Q99551 399 aaKnown RBP12.13□□□□□ -0.47
CDT1-203ENST00000569140 CENPKQ9BS16 269 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 ERVK-6Q9BXR3 956 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 SEMA3GQ9NS98 782 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 LGALS13Q9UHV8 139 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 MID2Q9UJV3 735 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 EMCNQ9ULC0 261 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 PCDHGA11Q9Y5H2 935 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 KCNMB2Q9Y691 235 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 ZFHX4Q86UP3 3567 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 ZZEF1O43149 2961 aa12.13□□□□□ -0.47
CDT1-203ENST00000569140 CFAP47Q6ZTR5 3102 aa12.12□□□□□ -0.47
CDT1-203ENST00000569140 LRIT2A6NDA9 550 aa12.12□□□□□ -0.47
CDT1-203ENST00000569140 A6NL46 340 aa12.12□□□□□ -0.47
CDT1-203ENST00000569140 VSTM2BA6NLU5 285 aa12.12□□□□□ -0.47
CDT1-203ENST00000569140 IDSB3KWA1 339 aa12.12□□□□□ -0.47
CDT1-203ENST00000569140 C4orf51C9J302 202 aa12.12□□□□□ -0.47
CDT1-203ENST00000569140 SAP18O00422 153 aaKnown RBP12.12□□□□□ -0.47
CDT1-203ENST00000569140 ATXN7O15265 892 aaPredicted RBP12.12□□□□□ -0.47
CDT1-203ENST00000569140 UGDHO60701 494 aa12.12□□□□□ -0.47
CDT1-203ENST00000569140 ALOX12BO75342 701 aa12.12□□□□□ -0.47
CDT1-203ENST00000569140 WFS1O76024 890 aa12.12□□□□□ -0.47
CDT1-203ENST00000569140 ONECUT2O95948 504 aa12.12□□□□□ -0.47
CDT1-203ENST00000569140 RECKO95980 971 aa12.12□□□□□ -0.47
CDT1-203ENST00000569140 OTCP00480 354 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms