RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 FIGNL2A6NMB9 653 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 E5RI56 91 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 GFYI3L273 518 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 AP3B1O00203 1094 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 BCKDKO14874 412 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 ZBTB14O43829 449 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 VAPBO95292 243 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 IFNB1P01574 187 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 SLC35G6P0C7Q6 338 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 MPC1LP0DKB6 136 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 ACVR2AP27037 513 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 ARNTP27540 789 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 NMBRP28336 390 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 IMPA1P29218 277 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 CYLC1P35663 651 aaPredicted RBP11.64□□□□□ -0.55
SNX29-207ENST00000568949 COILP38432 576 aaPredicted RBP11.64□□□□□ -0.55
SNX29-207ENST00000568949 CLCN7P51798 805 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 DGKQP52824 942 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 SESN2P58004 480 aaPredicted RBP11.64□□□□□ -0.55
SNX29-207ENST00000568949 SKP1P63208 163 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 OASLQ15646 514 aaKnown RBP11.64□□□□□ -0.55
SNX29-207ENST00000568949 SLC25A35Q3KQZ1 300 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 QSOX2Q6ZRP7 698 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 RGS9BPQ6ZS82 235 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 SLC26A11Q86WA9 606 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 ZZZ3Q8IYH5 903 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 CYP4X1Q8N118 509 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 CYP4Z2PQ8N1L4 340 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 TMEM156Q8N614 296 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 UBL4BQ8N7F7 174 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 LRRC57Q8N9N7 239 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 OR5T3Q8NGG3 340 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 OR10Q1Q8NGQ4 319 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 GOT1L1Q8NHS2 421 aaPredicted RBP11.64□□□□□ -0.55
SNX29-207ENST00000568949 CREB3L4Q8TEY5 395 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 GPATCH1Q9BRR8 931 aaKnown RBP11.64□□□□□ -0.55
SNX29-207ENST00000568949 TTYH2Q9BSA4 534 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 DEFB127Q9H1M4 99 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 TIMMDC1Q9NPL8 285 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 CCDC177Q9NQR7 707 aaPredicted RBP11.64□□□□□ -0.55
SNX29-207ENST00000568949 EIF2B3Q9NR50 452 aaKnown RBP11.64□□□□□ -0.55
SNX29-207ENST00000568949 PNPLA3Q9NST1 481 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 DRG1Q9Y295 367 aaKnown RBP11.64□□□□□ -0.55
SNX29-207ENST00000568949 CRYL1Q9Y2S2 319 aa11.64□□□□□ -0.55
SNX29-207ENST00000568949 TCRBV7S2A1N4TA0A589 114 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 ZNF860A6NHJ4 632 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 MIF4GDA9UHW6 222 aaKnown RBP11.63□□□□□ -0.55
SNX29-207ENST00000568949 NPIPA2E9PIF3 369 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 NPIPA3F8WFD2 350 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 CHST10O43529 356 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 LCMT2O60294 686 aaKnown RBP11.63□□□□□ -0.55
SNX29-207ENST00000568949 GALR3O60755 368 aaPredicted RBP11.63□□□□□ -0.55
SNX29-207ENST00000568949 TUBB4AP04350 444 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 GLI4P10075 376 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 ENO3P13929 434 aaPredicted RBP11.63□□□□□ -0.55
SNX29-207ENST00000568949 OGNP20774 298 aaKnown RBP11.63□□□□□ -0.55
SNX29-207ENST00000568949 GRK3P35626 688 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 KIR2DL3P43628 341 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 NPY2RP49146 381 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 GPR85P60893 370 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 PPIAP62937 165 aaKnown RBP11.63□□□□□ -0.55
SNX29-207ENST00000568949 CRADDP78560 199 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 CAPN13Q6MZZ7 669 aaPredicted RBP11.63□□□□□ -0.55
SNX29-207ENST00000568949 B3GNT6Q6ZMB0 384 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 MDGA2Q7Z553 956 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 TC2NQ8N9U0 490 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 MFSD9Q8NBP5 474 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 ATG4AQ8WYN0 398 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 PTCHD1Q96NR3 888 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 SARGQ9BW04 601 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 KIFC1Q9BW19 673 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 FRMD8P1Q9BZ68 369 aaPredicted RBP11.63□□□□□ -0.55
SNX29-207ENST00000568949 ZDHHC11Q9H8X9 412 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 CLK4Q9HAZ1 481 aaKnown RBP11.63□□□□□ -0.55
SNX29-207ENST00000568949 BFARQ9NZS9 450 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 AMFRQ9UKV5 643 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 VPS9D1Q9Y2B5 631 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 CSPG4Q6UVK1 2322 aa11.63□□□□□ -0.55
SNX29-207ENST00000568949 FN1P02751 2386 aaKnown RBP11.62□□□□□ -0.55
SNX29-207ENST00000568949 IGKV3D-11A0A0A0MRZ8 115 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 A0A0G2JNJ9 132 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 TCRBV16S1A1N1A0A5B0 115 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 GRID2IPA4D2P6 1211 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 ACOT7O00154 380 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 LIASO43766 372 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 B4GALT2O60909 372 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 ITGA10O75578 1167 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 ALOX12P18054 663 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 CLCN2P51788 898 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 NR0B1P51843 470 aaKnown RBP11.62□□□□□ -0.55
SNX29-207ENST00000568949 TBPL1P62380 186 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 PAMR1Q6UXH9 720 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 CYHR1Q6ZMK1 362 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 TAOK1Q7L7X3 1001 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 PEX26Q7Z412 305 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 C17orf64Q86WR6 236 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 CDC20BQ86Y33 519 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 LIX1LQ8IVB5 337 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 GPALPP1Q8IXQ4 340 aa11.62□□□□□ -0.55
SNX29-207ENST00000568949 PRELID2Q8N945 189 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms