RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 MS4A8Q9BY19 250 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 MFRPQ9BY79 579 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 RHBGQ9H310 441 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 REEP4Q9H6H4 257 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 SLC6A20Q9NP91 592 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 C6orf203Q9P0P8 240 aaPredicted RBP6.76□□□□□ -1.33
SMG1-215ENST00000568239 CPNE7Q9UBL6 633 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 ADGRE2Q9UHX3 823 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 PCDHGB4Q9UN71 923 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 AK5Q9Y6K8 562 aa6.76□□□□□ -1.33
SMG1-215ENST00000568239 TCRBV3S1A0A5B6 114 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 TOR1BO14657 336 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 EPN2O95208 641 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 TBX6O95947 436 aaPredicted RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 C1QCP02747 245 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 MT-ND1P03886 318 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 C8BP07358 591 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 PCSK2P16519 638 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 IL10P22301 178 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 CD38P28907 300 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SLC7A1P30825 629 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 BCL6P41182 706 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SSR2P43308 183 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 BLKP51451 505 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 CASP9P55211 416 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 WLSQ5T9L3 541 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 TICAM1Q8IUC6 712 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 KBTBD2Q8IY47 623 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SPEM1Q8N4L4 309 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 DTWD1Q8N5C7 304 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ICA1LQ8NDH6 482 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 OR8J2Q8NGG1 315 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 OR4A15Q8NGL6 344 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SLC37A2Q8TED4 501 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 CIDECQ96AQ7 238 aaPredicted RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 NAF1Q96HR8 494 aaKnown RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 ZNF184Q99676 751 aaPredicted RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 KLHL4Q9C0H6 718 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 VCX3BQ9H321 246 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 FAM120CQ9NX05 1096 aaKnown RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 MUTYHQ9UIF7 546 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 MCM8Q9UJA3 840 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 PCOLCE2Q9UKZ9 415 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SIT1Q9Y3P8 196 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 NEUROG3Q9Y4Z2 214 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 VPS13AQ96RL7 3174 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SCN2AQ99250 2005 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ELOVL7A1L3X0 281 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 FAM149AA5PLN7 773 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 AQP12BA6NM10 295 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 EIF4E1BA6NMX2 242 aaKnown RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 METTL12A8MUP2 240 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 CLIC1O00299 241 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 CCNDBP1O95273 360 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ENGP17813 658 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 MAGP20916 626 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 CD27P26842 260 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 HTR1EP28566 365 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 TPP2P29144 1249 aaPredicted RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 CXCL12P48061 93 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 WNT3P56703 355 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ABATP80404 500 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ZNF385BQ569K4 471 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 TJAP1Q5JTD0 557 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 LCN8Q6JVE9 175 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 PAGE2Q7Z2X7 111 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 R3HCC1LQ7Z5L2 792 aaKnown RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 PROSER1Q86XN7 944 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 AQP12AQ8IXF9 295 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ADGRF3Q8IZF5 1079 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 NAGSQ8N159 534 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 C10orf111Q8N326 155 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 GALNT4Q8N4A0 578 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 PJA1Q8NG27 643 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 DNAJB8Q8NHS0 232 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 MAFAQ8NHW3 353 aaPredicted RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 FBXO30Q8TB52 745 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 GPBAR1Q8TDU6 330 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 FAM162AQ96A26 154 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ZUFSPQ96AP4 578 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 EME1Q96AY2 570 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 RGMAQ96B86 450 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SLCO4A1Q96BD0 722 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SLC22A18Q96BI1 424 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 KLHL31Q9H511 634 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 RPF2Q9H7B2 306 aaKnown RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 KAT8Q9H7Z6 458 aaKnown RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 TMEM184CQ9NVA4 438 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 ATAD3AQ9NVI7 634 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 C5AR2Q9P296 337 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 MAGEL2Q9UJ55 1249 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 MAN2B2Q9Y2E5 1009 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 SPTBP11277 2137 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 A0A0J9YVX5 310 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 TRBC2A0A5B9 178 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 A6NCN8 305 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 TXNDC9O14530 226 aa6.75□□□□□ -1.33
SMG1-215ENST00000568239 CAPN5O15484 640 aaPredicted RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 ERI3O43414 337 aaKnown RBP6.75□□□□□ -1.33
SMG1-215ENST00000568239 PRICKLE3O43900 615 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms