RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 CLDN1O95832 211 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 CRYABP02511 175 aaKnown RBP18.99■□□□□ 0.63
CLN6-207ENST00000566347 ZNF888P0CJ79 500 aaPredicted RBP18.99■□□□□ 0.63
CLN6-207ENST00000566347 SLC12A2P55011 1212 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 ZNF460Q14592 562 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 SFT2D3Q587I9 215 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 ACER2Q5QJU3 275 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 PAPD4Q6PIY7 484 aaKnown RBP18.99■□□□□ 0.63
CLN6-207ENST00000566347 NXPE4Q6UWF7 544 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 TMPRSS11BQ86T26 416 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 DNAJB8Q8NHS0 232 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 RBCK1Q9BYM8 510 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 SPNS1Q9H2V7 528 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 GPAMQ9HCL2 828 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 CTNNAL1Q9UBT7 734 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 SLC22A14Q9Y267 594 aa18.99■□□□□ 0.63
CLN6-207ENST00000566347 CHST10O43529 356 aa18.98■□□□□ 0.63
CLN6-207ENST00000566347 STSP08842 583 aa18.98■□□□□ 0.63
CLN6-207ENST00000566347 TDGF1P3P51864 188 aa18.98■□□□□ 0.63
CLN6-207ENST00000566347 OR4D2P58180 307 aa18.98■□□□□ 0.63
CLN6-207ENST00000566347 CALCOCO2Q13137 446 aa18.98■□□□□ 0.63
CLN6-207ENST00000566347 MEP1AQ16819 746 aa18.98■□□□□ 0.63
CLN6-207ENST00000566347 UTP15Q8TED0 518 aaKnown RBP18.98■□□□□ 0.63
CLN6-207ENST00000566347 PYROXD1Q8WU10 500 aa18.98■□□□□ 0.63
CLN6-207ENST00000566347 CDKL2Q92772 493 aa18.98■□□□□ 0.63
CLN6-207ENST00000566347 MCMBPQ9BTE3 642 aa18.98■□□□□ 0.63
CLN6-207ENST00000566347 SLC6A16Q9GZN6 736 aa18.98■□□□□ 0.63
CLN6-207ENST00000566347 PYCARDQ9ULZ3 195 aa18.98■□□□□ 0.63
CLN6-207ENST00000566347 A0A1B0GUH1 482 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 FAM187AA6NFU0 413 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 GNAZP19086 355 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 TAS2R50P59544 299 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 POU4F1Q01851 419 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 USP10Q14694 798 aaKnown RBP18.97■□□□□ 0.63
CLN6-207ENST00000566347 RBBP5Q15291 538 aaKnown RBP18.97■□□□□ 0.63
CLN6-207ENST00000566347 TSNQ15631 228 aaKnown RBP18.97■□□□□ 0.63
CLN6-207ENST00000566347 MAATS1Q7Z4T9 603 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 CEP97Q8IW35 865 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 BEST3Q8N1M1 668 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 SLC5A8Q8N695 610 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 AMER2Q8N7J2 671 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 ANKRD53Q8N9V6 530 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 ANKRD49Q8WVL7 239 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 TSLPQ969D9 159 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 TSPAN17Q96FV3 270 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 ERP44Q9BS26 406 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 WHRNQ9P202 907 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 TXNDC16Q9P2K2 825 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 PCDHGB6Q9Y5F9 930 aa18.97■□□□□ 0.63
CLN6-207ENST00000566347 EIF3HO15372 352 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLN6-207ENST00000566347 SERPINA6P08185 405 aa18.96■□□□□ 0.63
CLN6-207ENST00000566347 OLR1P78380 273 aa18.96■□□□□ 0.63
CLN6-207ENST00000566347 ZNF766Q5HY98 468 aa18.96■□□□□ 0.63
CLN6-207ENST00000566347 QSOX2Q6ZRP7 698 aa18.96■□□□□ 0.63
CLN6-207ENST00000566347 CAPN12Q6ZSI9 719 aa18.96■□□□□ 0.63
CLN6-207ENST00000566347 CRLF3Q8IUI8 442 aa18.96■□□□□ 0.63
CLN6-207ENST00000566347 KLHDC8AQ8IYD2 350 aa18.96■□□□□ 0.63
CLN6-207ENST00000566347 LGI4Q8N135 537 aa18.96■□□□□ 0.63
CLN6-207ENST00000566347 TTLQ8NG68 377 aa18.96■□□□□ 0.63
CLN6-207ENST00000566347 UTP23Q9BRU9 249 aaKnown RBP18.96■□□□□ 0.63
CLN6-207ENST00000566347 DERL2Q9GZP9 239 aa18.96■□□□□ 0.63
CLN6-207ENST00000566347 PSMD12O00232 456 aaPredicted RBP18.95■□□□□ 0.62
CLN6-207ENST00000566347 CDK2AP1O14519 115 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 FANCGO15287 622 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 PRMT3O60678 531 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 B4GALT2O60909 372 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 H2AFYO75367 372 aaKnown RBP18.95■□□□□ 0.62
CLN6-207ENST00000566347 WDR47O94967 919 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 B3GALT4O96024 378 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 SMIM10L1P0DMW3 83 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 RNH1P13489 461 aaKnown RBP18.95■□□□□ 0.62
CLN6-207ENST00000566347 HNF4AP41235 474 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 SLC6A12P48065 614 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 SLC26A5P58743 744 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 RAB8AP61006 207 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 HYAL2Q12891 473 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 TUBA3CQ13748 450 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 FCRLBQ6BAA4 426 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 TUBA3EQ6PEY2 450 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 GFRALQ6UXV0 394 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 TCAIMQ8N3R3 496 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 RHBDF1Q96CC6 855 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 SMIM10Q96HG1 83 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 PTCHD1Q96NR3 888 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 CAPS2Q9BXY5 557 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 SAYSD1Q9NPB0 183 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 SMYD2Q9NRG4 433 aa18.95■□□□□ 0.62
CLN6-207ENST00000566347 DNAJB6O75190 326 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 C1GALT1C1LP0DN25 315 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 GSTM2P28161 218 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 SSTR1P30872 391 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 KCNK10P57789 538 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 STXBP1P61764 594 aaKnown RBP18.94■□□□□ 0.62
CLN6-207ENST00000566347 TGFBIQ15582 683 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 SLCO4C1Q6ZQN7 724 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 CYS1Q717R9 158 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 HORMAD2Q8N7B1 307 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 SPATA4Q8NEY3 305 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 CREB3L4Q8TEY5 395 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 RELTQ969Z4 430 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms