RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 HEXDCQ8WVB3 486 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.9□□□□□ -1.46
UBFD1-204ENST00000565634 NRGNQ92686 78 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 ESAMQ96AP7 390 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 C1orf159Q96HA4 380 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 KIRREL1Q96J84 757 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 UBXN10Q96LJ8 280 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 TIMM29Q9BSF4 260 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 TMEM109Q9BVC6 243 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 DDA1Q9BW61 102 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 NUDT9Q9BW91 350 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 TBC1D10AQ9BXI6 508 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 VPS11Q9H270 941 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 COG4Q9H9E3 785 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 SNX15Q9NRS6 342 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 TRNAU1APQ9NX07 287 aaKnown RBP5.9□□□□□ -1.46
UBFD1-204ENST00000565634 TMEM216Q9P0N5 145 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 SLC17A7Q9P2U7 560 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 GNPTGQ9UJJ9 305 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 EMCNQ9ULC0 261 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 ASB1Q9Y576 335 aa5.9□□□□□ -1.46
UBFD1-204ENST00000565634 NUP214P35658 2090 aaPredicted RBP5.89□□□□□ -1.47
UBFD1-204ENST00000565634 A0A096LPK6 155 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 C17orf113A0A1B0GUU1 675 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 NPEPPSL1A6NEC2 478 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 ARHGEF33A8MVX0 844 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 C19orf84I3L1E1 186 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 GFYI3L273 518 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 HGSO14964 777 aaPredicted RBP5.89□□□□□ -1.47
UBFD1-204ENST00000565634 TAPBPO15533 448 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 NRP2O60462 931 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 SPAG6O75602 509 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 CREG1O75629 220 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 PPM1BO75688 479 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 PRKD3O94806 890 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 MATN4O95460 622 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 C1orf105O95561 183 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 PYGLP06737 847 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 INHBAP08476 426 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 SNRPAP09012 282 aaKnown RBP5.89□□□□□ -1.47
UBFD1-204ENST00000565634 RALBP11234 206 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 CD1DP15813 335 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 CPEP16870 476 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 IDSP22304 550 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 KELP23276 732 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 HTR1EP28566 365 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 TYK2P29597 1187 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 GDF5P43026 501 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 ART1P52961 327 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 RAB10P61026 200 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 UBE2IP63279 158 aaKnown RBP5.89□□□□□ -1.47
UBFD1-204ENST00000565634 MC2RQ01718 297 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 POU4F1Q01851 419 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 FOXM1Q08050 763 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 DMPKQ09013 629 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 GTF2H3Q13889 308 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 CSHL1Q14406 222 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 MLC1Q15049 377 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 TSNQ15631 228 aaKnown RBP5.89□□□□□ -1.47
UBFD1-204ENST00000565634 KRT71Q3SY84 523 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.89□□□□□ -1.47
UBFD1-204ENST00000565634 AARS2Q5JTZ9 985 aaKnown RBP5.89□□□□□ -1.47
UBFD1-204ENST00000565634 FAM45BPQ6NSW5 357 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 ZNF449Q6P9G9 518 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 LVRNQ6Q4G3 990 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 TIFABQ6ZNK6 161 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 OTOAQ7RTW8 1153 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 ISCA2Q86U28 154 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 CDH24Q86UP0 819 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 TRABD2AQ86V40 505 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 PRIMA1Q86XR5 153 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 TDRPQ86YL5 185 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 LMNTD2Q8IXW0 634 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 SLC22A15Q8IZD6 547 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 SFRP1Q8N474 314 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 ZBTB2Q8N680 514 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 KCT2Q8NC54 265 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 PPFIBP2Q8ND30 876 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 OR4E2Q8NGC2 313 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 DNAJB8Q8NHS0 232 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 FAM45AQ8TCE6 357 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 SLC37A2Q8TED4 501 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 DENND1AQ8TEH3 1009 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 TFGQ92734 400 aaPredicted RBP5.89□□□□□ -1.47
UBFD1-204ENST00000565634 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.89□□□□□ -1.47
UBFD1-204ENST00000565634 LINGO1Q96FE5 620 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 C12orf66Q96MD2 445 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 PKP4Q99569 1192 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 MENTQ9BUN1 341 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 EFHD1Q9BUP0 239 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 B3GNT4Q9C0J1 378 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 ING2Q9H160 280 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 CENPHQ9H3R5 247 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 RMI1Q9H9A7 625 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 TMBIM4Q9HC24 238 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 SLC40A1Q9NP59 571 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 SPHK1Q9NYA1 384 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 TAS2R13Q9NYV9 303 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 OGFRQ9NZT2 677 aa5.89□□□□□ -1.47
UBFD1-204ENST00000565634 LGALS13Q9UHV8 139 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms