RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ANKRD37Q7Z713 158 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 PDSS2Q86YH6 399 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 CTAGE3PQ8IX95 158 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 TBC1D19Q8N5T2 526 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 ABHD11Q8NFV4 315 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 ZCCHC10Q8TBK6 192 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 OR4K3Q96R72 315 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 RBBP8Q99708 897 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 ANKHQ9HCJ1 492 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 CTNNAL1Q9UBT7 734 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 ENTPD4Q9Y227 616 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 CROCCQ5TZA2 2017 aa17.43■□□□□ 0.38
CLN6-204ENST00000564752 FAM159BA6NKW6 160 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 A8MUI8 341 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 URI1O94763 535 aaPredicted RBP17.42■□□□□ 0.38
CLN6-204ENST00000564752 MST1P26927 711 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 GP5P40197 560 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 AGTR2P50052 363 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 CDKL1Q00532 357 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 MEF2AQ02078 507 aaPredicted RBP17.42■□□□□ 0.38
CLN6-204ENST00000564752 USP10Q14694 798 aaKnown RBP17.42■□□□□ 0.38
CLN6-204ENST00000564752 TSNQ15631 228 aaKnown RBP17.42■□□□□ 0.38
CLN6-204ENST00000564752 BTBD16Q32M84 506 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 SP5Q6BEB4 398 aaPredicted RBP17.42■□□□□ 0.38
CLN6-204ENST00000564752 ZDHHC24Q6UX98 284 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 MFSD9Q8NBP5 474 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 PLPP5Q8NEB5 264 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 ANKRD49Q8WVL7 239 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 SLC5A11Q8WWX8 675 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 TSNARE1Q96NA8 513 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 CAB39LQ9H9S4 337 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 MTO1Q9Y2Z2 717 aaKnown RBP17.42■□□□□ 0.38
CLN6-204ENST00000564752 DYRK1BQ9Y463 629 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 OARD1Q9Y530 152 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 SLC22A7Q9Y694 548 aa17.42■□□□□ 0.38
CLN6-204ENST00000564752 OR1F1O43749 312 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 RDH16O75452 317 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 UNC5CO95185 931 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 STX2P32856 288 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 MAGEA4P43358 317 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 GPX6P59796 221 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 SRSF11Q05519 484 aaKnown RBP17.41■□□□□ 0.38
CLN6-204ENST00000564752 CSHL1Q14406 222 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 TRADDQ15628 312 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 ACER2Q5QJU3 275 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 CATSPEREQ5SY80 951 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 CYS1Q717R9 158 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 THOC6Q86W42 341 aaKnown RBP17.41■□□□□ 0.38
CLN6-204ENST00000564752 OR4K1Q8NGD4 311 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 M1APQ8TC57 530 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 NEIL2Q969S2 332 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 ZNF354BQ96LW1 612 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 GPR22Q99680 433 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 SARGQ9BW04 601 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 DERL2Q9GZP9 239 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 COPG2Q9UBF2 871 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 NAALAD2Q9Y3Q0 740 aa17.41■□□□□ 0.38
CLN6-204ENST00000564752 SCN3AQ9NY46 2000 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 TRBC2A0A5B9 178 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 ESYT3A0FGR9 886 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 PHGDHO43175 533 aaKnown RBP17.4■□□□□ 0.38
CLN6-204ENST00000564752 NDUFS4O43181 175 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 HNRNPRO43390 633 aaKnown RBP17.4■□□□□ 0.38
CLN6-204ENST00000564752 STMN1P16949 149 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 IL10P22301 178 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 HNMTP50135 292 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 SLC7A5Q01650 507 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 RHAGQ02094 409 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 EXT1Q16394 746 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 WHAMMP3Q1A5X7 153 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 KBTBD12Q3ZCT8 623 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 ZNF766Q5HY98 468 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 TMPRSS11BQ86T26 416 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 BEST3Q8N1M1 668 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 AFAP1L2Q8N4X5 818 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 ZNF592Q92610 1267 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 OR1F2PQ96R84 312 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 UNKQ9C0B0 810 aaKnown RBP17.4■□□□□ 0.38
CLN6-204ENST00000564752 MMP25Q9NPA2 562 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 LANCL2Q9NS86 450 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 SEC14L3Q9UDX4 400 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 SLC22A14Q9Y267 594 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 PCDHGB6Q9Y5F9 930 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 ABCA12Q86UK0 2595 aa17.4■□□□□ 0.38
CLN6-204ENST00000564752 TRGV8A0A0C4DH27 118 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 WISP3O95389 354 aaPredicted RBP17.39■□□□□ 0.37
CLN6-204ENST00000564752 SERPIND1P05546 499 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 SPRP35270 261 aaPredicted RBP17.39■□□□□ 0.37
CLN6-204ENST00000564752 PWP1Q13610 501 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 TUBA3CQ13748 450 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 HERC3Q15034 1050 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 NSDHLQ15738 373 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.39■□□□□ 0.37
CLN6-204ENST00000564752 SFT2D3Q587I9 215 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 FCRLBQ6BAA4 426 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 TUBA3EQ6PEY2 450 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 PPM1NQ8N819 430 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 MARVELD3Q96A59 401 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 MOCOSQ96EN8 888 aa17.39■□□□□ 0.37
CLN6-204ENST00000564752 PEX11GQ96HA9 241 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms