RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 FAM198BQ6UWH4 519 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 LAS2Q8IYD9 372 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 L3MBTL4Q8NA19 623 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 ARMC2Q8NEN0 867 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 OR7G3Q8NG95 312 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 TCP10LQ8TDR4 215 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 TRPC4APQ8TEL6 797 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 ZNF483Q8TF39 744 aaPredicted RBP15.17■□□□□ 0.02
RAB40C-208ENST00000564703 MIEF2Q96C03 454 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 L3HYPDHQ96EM0 354 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 CMTM7Q96FZ5 175 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 NSUN5Q96P11 429 aaKnown RBP15.17■□□□□ 0.02
RAB40C-208ENST00000564703 CATSPER2Q96P56 530 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 SLC6A16Q9GZN6 736 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 SLC26A1Q9H2B4 701 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 WDR54Q9H977 334 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 MKKSQ9NPJ1 570 aaPredicted RBP15.17■□□□□ 0.02
RAB40C-208ENST00000564703 SLC22A11Q9NSA0 550 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 MRPS2Q9Y399 296 aaKnown RBP15.17■□□□□ 0.02
RAB40C-208ENST00000564703 RNF11Q9Y3C5 154 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 NAALAD2Q9Y3Q0 740 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 MAP4K5Q9Y4K4 846 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 CACNA1BQ00975 2339 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 CDC14CA4D256 554 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 LRIT2A6NDA9 550 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 H0YIV9 168 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 SGK494L7N484 410 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 KLHL18O94889 574 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 WT1P19544 449 aaPredicted RBP15.16■□□□□ 0.02
RAB40C-208ENST00000564703 PIK3CBP42338 1070 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 NAGLUP54802 743 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 DNAJB13P59910 316 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 BTN3A2P78410 334 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 IFT88Q13099 833 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 DDX39BQ13838 428 aaKnown RBP15.16■□□□□ 0.02
RAB40C-208ENST00000564703 ZRSR2Q15696 482 aaKnown RBP15.16■□□□□ 0.02
RAB40C-208ENST00000564703 NKG7Q16617 165 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 DEFB134Q4QY38 66 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 TRIM40Q6P9F5 258 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 HDXQ7Z353 690 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 RAB43Q86YS6 212 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 ARHGEF39Q8N4T4 335 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 DTWD1Q8N5C7 304 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 OR52B6Q8NGF0 335 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 OR2Y1Q8NGV0 311 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 STT3BQ8TCJ2 826 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 UTP15Q8TED0 518 aaKnown RBP15.16■□□□□ 0.02
RAB40C-208ENST00000564703 SNRNP27Q8WVK2 155 aaKnown RBP15.16■□□□□ 0.02
RAB40C-208ENST00000564703 GAL3ST3Q96A11 431 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 ZBTB9Q96C00 473 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 VPS50Q96JG6 964 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 FAM111AQ96PZ2 611 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 CDK15Q96Q40 435 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 TMEM237Q96Q45 408 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 REXO4Q9GZR2 422 aaKnown RBP15.16■□□□□ 0.02
RAB40C-208ENST00000564703 C12orf65Q9H3J6 166 aaKnown RBP15.16■□□□□ 0.02
RAB40C-208ENST00000564703 PRORYQ9H606 182 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 CLK4Q9HAZ1 481 aaKnown RBP15.16■□□□□ 0.02
RAB40C-208ENST00000564703 ZBTB26Q9HCK0 441 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 KCNK9Q9NPC2 374 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 OXSMQ9NWU1 459 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 CCDC88CQ9P219 2028 aa15.16■□□□□ 0.02
RAB40C-208ENST00000564703 ERI3O43414 337 aaKnown RBP15.15■□□□□ 0.02
RAB40C-208ENST00000564703 GALR3O60755 368 aaPredicted RBP15.15■□□□□ 0.02
RAB40C-208ENST00000564703 TRIM13O60858 407 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 KLF7O75840 302 aaPredicted RBP15.15■□□□□ 0.02
RAB40C-208ENST00000564703 TGFB1P01137 390 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 IGHEP01854 428 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 ZGLP1P0C6A0 271 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 TSPAN8P19075 237 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 IL10P22301 178 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 PTX3P26022 381 aaPredicted RBP15.15■□□□□ 0.02
RAB40C-208ENST00000564703 PLA2G16P53816 162 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 CDC20Q12834 499 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 TMEM35AQ53FP2 167 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 C10orf62Q5T681 223 aaPredicted RBP15.15■□□□□ 0.02
RAB40C-208ENST00000564703 LIPMQ5VYY2 423 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 RPS27LQ71UM5 84 aaKnown RBP15.15■□□□□ 0.02
RAB40C-208ENST00000564703 EXOC3L1Q86VI1 746 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 PRSS58Q8IYP2 241 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 OR2L5Q8NG80 312 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 OR4F6Q8NGB9 312 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 OR51Q1Q8NH59 317 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 HUS1BQ8NHY5 278 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 ZNF473Q8WTR7 871 aaKnown RBP15.15■□□□□ 0.02
RAB40C-208ENST00000564703 THAP4Q8WY91 577 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 MTFMTQ96DP5 389 aaKnown RBP15.15■□□□□ 0.02
RAB40C-208ENST00000564703 MS4A6EQ96DS6 147 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 IP6K3Q96PC2 410 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 MTERF1Q99551 399 aaKnown RBP15.15■□□□□ 0.02
RAB40C-208ENST00000564703 ROGDIQ9GZN7 287 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 KLHL31Q9H511 634 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 ELOVL6Q9H5J4 265 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 COPS7BQ9H9Q2 264 aaPredicted RBP15.15■□□□□ 0.02
RAB40C-208ENST00000564703 SSU72Q9NP77 194 aaKnown RBP15.15■□□□□ 0.02
RAB40C-208ENST00000564703 C14orf105Q9NVL8 296 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 SNX6Q9UNH7 406 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 POLHQ9Y253 713 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 TSC22D4Q9Y3Q8 395 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 ACTL7BQ9Y614 415 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms