RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PAPD4Q6PIY7 484 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 QSOX2Q6ZRP7 698 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 CYS1Q717R9 158 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 THOC6Q86W42 341 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 ZC3HC1Q86WB0 502 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 LURAP1LQ8IV03 231 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 KLHL7Q8IXQ5 586 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 TMEM178AQ8NBL3 297 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 ARMC2Q8NEN0 867 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 UTP15Q8TED0 518 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 THAP3Q8WTV1 239 aaPredicted RBP11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 SMIM10Q96HG1 83 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 OLFM1Q99784 485 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 SLC6A16Q9GZN6 736 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 ENTPD4Q9Y227 616 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 OARD1Q9Y530 152 aa11.46□□□□□ -0.57
GTF3C1-204ENST00000564664 CPAMD8Q8IZJ3 1885 aa11.46□□□□□ -0.58
GTF3C1-204ENST00000564664 CELSR2Q9HCU4 2923 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 E7ESA3 106 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 HNRNPRO43390 633 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 UNC5CO95185 931 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 F10P00742 488 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 SERPIND1P05546 499 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 RNH1P13489 461 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 GNAZP19086 355 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 COL8A1P27658 744 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 CD96P40200 585 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 SLC26A5P58743 744 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 STXBP1P61764 594 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 GNG11P61952 73 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 REEP5Q00765 189 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 POU4F1Q01851 419 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 TUBA3CQ13748 450 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 PPP1R3AQ16821 1122 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 DEFB134Q4QY38 66 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 CDKL4Q5MAI5 379 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 HP1BP3Q5SSJ5 553 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 ZNF787Q6DD87 383 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 TUBA3EQ6PEY2 450 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 RPTNQ6XPR3 784 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 ADAMTSL2Q86TH1 951 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 FJX1Q86VR8 437 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 TICAM1Q8IUC6 712 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 CRLF3Q8IUI8 442 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 KLHDC8AQ8IYD2 350 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 BEST3Q8N1M1 668 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 TCAIMQ8N3R3 496 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 FAM98AQ8NCA5 519 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 MDS2Q8NDY4 140 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 FBXO36Q8NEA4 188 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 OR5T3Q8NGG3 340 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 ELP5Q8TE02 316 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 MOCOSQ96EN8 888 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 SCMH1Q96GD3 660 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 NAPGQ99747 312 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 NPLQ9BXD5 320 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 RHOJQ9H4E5 214 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 NT5DC2Q9H857 520 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 TRIM45Q9H8W5 580 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 PRDM9Q9NQV7 894 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 GPRC5BQ9NZH0 403 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 COPG2Q9UBF2 871 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 CTNNAL1Q9UBT7 734 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 SLC22A14Q9Y267 594 aa11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 KLF2Q9Y5W3 355 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-204ENST00000564664 A0A088AWK7 358 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 FAM95CA0A1B0GW59 222 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 ASPDHA6ND91 283 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 OR2W5A6NFC9 320 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 EFCAB8A8MWE9 144 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 PSMD12O00232 456 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 ZG16O60844 167 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 SP1P08047 785 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 ZNF888P0CJ79 500 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 C1GALT1C1LP0DN25 315 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 ZNF10P21506 573 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 MST1P26927 711 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 EEF1DP29692 281 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 CA7P43166 264 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 SLC12A2P55011 1212 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 KCNK10P57789 538 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 TAS2R39P59534 338 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 PDIA2Q13087 525 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 RBBP5Q15291 538 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 OR1C1Q15619 314 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 SP5Q6BEB4 398 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 SLC25A25Q6KCM7 469 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 RPS19BP1Q86WX3 136 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 KRT78Q8N1N4 520 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 C7orf57Q8NEG2 295 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 CREB3L4Q8TEY5 395 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 ANP32BQ92688 251 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 CDKL2Q92772 493 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 TSPAN17Q96FV3 270 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 CAPZA3Q96KX2 299 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 PWWP2AQ96N64 755 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 PTCHD1Q96NR3 888 aa11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 WDR83Q9BRX9 315 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-204ENST00000564664 DERL2Q9GZP9 239 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms