RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 FGF4P08620 206 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 GRK2P25098 689 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 SERPINB3P29508 390 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 HTR6P50406 440 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 ATP1A2P50993 1020 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 BST1Q10588 318 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 DDX39BQ13838 428 aaKnown RBP11.85□□□□□ -0.51
KARS-204ENST00000564578 TGIF1Q15583 401 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 MUM1Q2TAK8 710 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 UGT3A2Q3SY77 523 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 C1orf189Q5VU69 101 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 YOD1Q5VVQ6 348 aaPredicted RBP11.85□□□□□ -0.51
KARS-204ENST00000564578 CLEC6AQ6EIG7 209 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 FAM199XQ6PEV8 388 aaPredicted RBP11.85□□□□□ -0.51
KARS-204ENST00000564578 UBE3DQ7Z6J8 389 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 PDSS2Q86YH6 399 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 DSELQ8IZU8 1212 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 UTP15Q8TED0 518 aaKnown RBP11.85□□□□□ -0.51
KARS-204ENST00000564578 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.85□□□□□ -0.51
KARS-204ENST00000564578 SREK1Q8WXA9 508 aaKnown RBP11.85□□□□□ -0.51
KARS-204ENST00000564578 MS4A6EQ96DS6 147 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 MAGEB10Q96LZ2 347 aaPredicted RBP11.85□□□□□ -0.51
KARS-204ENST00000564578 F2RL3Q96RI0 385 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 SORT1Q99523 831 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 OR51B5Q9H339 312 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 ZDHHC2Q9UIJ5 367 aa11.85□□□□□ -0.51
KARS-204ENST00000564578 URB1O60287 2271 aaKnown RBP11.85□□□□□ -0.51
KARS-204ENST00000564578 SCN3AQ9NY46 2000 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 TMEM233B4DJY2 109 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 MANBAO00462 879 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 DSCR3O14972 297 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 SH3BGRLO75368 114 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 PDYNP01213 254 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 ENO1P06733 434 aaKnown RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 ZNF888P0CJ79 500 aaPredicted RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 IL1RNP18510 177 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 CD82P27701 267 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 RAB8AP61006 207 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 ABCE1P61221 599 aaKnown RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 RPS13P62277 151 aaKnown RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 RGS1Q08116 209 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 ABRAXAS2Q15018 415 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 HSP90B2PQ58FF3 399 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 DEPDC1Q5TB30 811 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 TTC29Q8NA56 475 aaPredicted RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 PPP1R14CQ8TAE6 165 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 ZCCHC10Q8TBK6 192 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 CCT6BQ92526 530 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 FGF11Q92914 225 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 NKD1Q969G9 470 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 REPS1Q96D71 796 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 NLNQ9BYT8 704 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 SLC29A3Q9BZD2 475 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 REXO4Q9GZR2 422 aaKnown RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 ELOVL6Q9H5J4 265 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 CCDC86Q9H6F5 360 aaKnown RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 LHX9Q9NQ69 397 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 PSD3Q9NYI0 1048 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 ADGRE2Q9UHX3 823 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 PPT2Q9UMR5 302 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 SNX6Q9UNH7 406 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 DNAJC15Q9Y5T4 150 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 A0A0A6YYC8 382 aaPredicted RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 TMEM114B3SHH9 223 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 I3L1I5 382 aaPredicted RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 DNAJB6O75190 326 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 SNNO75324 88 aaPredicted RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 ONECUT2O95948 504 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 HBQ1P09105 142 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 SERPINB1P30740 379 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 OR1D4P47884 311 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 SLC1A6P48664 564 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 ABHD18Q0P651 414 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 IFT88Q13099 833 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 STX3Q13277 289 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 DEFB134Q4QY38 66 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 SGO1Q5FBB7 561 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 TOR1AIP1Q5JTV8 583 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 C10orf62Q5T681 223 aaPredicted RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 KHDRBS2Q5VWX1 349 aaKnown RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 TTC19Q6DKK2 380 aaPredicted RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 C6orf15Q6UXA7 325 aaPredicted RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 NLGN4XQ8N0W4 816 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 METTL27Q8N6F8 245 aaPredicted RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 AMER3Q8N944 861 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 NLGN4YQ8NFZ3 816 aaPredicted RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 OR9A4Q8NGU2 314 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 PROKR1Q8TCW9 393 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 AGR3Q8TD06 166 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 ZNF75CPQ92670 426 aaPredicted RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 MVB12AQ96EY5 273 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 CMTM7Q96FZ5 175 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 SLC7A5P2Q9GIP4 190 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 TUBB1Q9H4B7 451 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 MANSC1Q9H8J5 431 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 EML4Q9HC35 981 aaKnown RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 TXLNGQ9NUQ3 528 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 INTS9Q9NV88 658 aaKnown RBP11.84□□□□□ -0.51
KARS-204ENST00000564578 PADI1Q9ULC6 663 aa11.84□□□□□ -0.51
KARS-204ENST00000564578 TRAF6Q9Y4K3 522 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms