RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 C19orf25Q9UFG5 118 aaPredicted RBP12.94□□□□□ -0.34
CNOT1-206ENST00000564557 ZNF180Q9UJW8 692 aa12.94□□□□□ -0.34
CNOT1-206ENST00000564557 SCN3AQ9NY46 2000 aa12.94□□□□□ -0.34
CNOT1-206ENST00000564557 MED13Q9UHV7 2174 aa12.94□□□□□ -0.34
CNOT1-206ENST00000564557 ATMQ13315 3056 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 A0A088AWK7 358 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 ZNF860A6NHJ4 632 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 TRIM49D1C9J1S8 452 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 K7EPI3 171 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 PSMD12O00232 456 aaPredicted RBP12.93□□□□□ -0.34
CNOT1-206ENST00000564557 ALOX12BO75342 701 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 HPP00738 406 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 ABHD2P08910 425 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 SNRPAP09012 282 aaKnown RBP12.93□□□□□ -0.34
CNOT1-206ENST00000564557 RBP1P09455 135 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 ZNF888P0CJ79 500 aaPredicted RBP12.93□□□□□ -0.34
CNOT1-206ENST00000564557 C8orf89P0DMQ9 161 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 EPB42P16452 691 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 ZNF10P21506 573 aaPredicted RBP12.93□□□□□ -0.34
CNOT1-206ENST00000564557 CASRP41180 1078 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 KCNC1P48547 511 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 RAB8AP61006 207 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 AP2B1P63010 937 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 EEF1A2Q05639 463 aaKnown RBP12.93□□□□□ -0.34
CNOT1-206ENST00000564557 TGM3Q08188 693 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 CHIT1Q13231 466 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 TSNAXIP1Q2TAA8 658 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 TOR1AIP1Q5JTV8 583 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 UBAP2Q5T6F2 1119 aaKnown RBP12.93□□□□□ -0.34
CNOT1-206ENST00000564557 AGAP7PQ5VUJ5 663 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 NDUFAF7Q7L592 441 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 PRSS41Q7RTY9 318 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 TMEM151BQ8IW70 566 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 ZC3H7AQ8IWR0 971 aaKnown RBP12.93□□□□□ -0.34
CNOT1-206ENST00000564557 CENPLQ8N0S6 344 aaPredicted RBP12.93□□□□□ -0.34
CNOT1-206ENST00000564557 ANKRD53Q8N9V6 530 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 OR11G2Q8NGC1 345 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 UBE2E3Q969T4 207 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 C8orf44Q96CB5 159 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 PEX11GQ96HA9 241 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 THOC3Q96J01 351 aaKnown RBP12.93□□□□□ -0.34
CNOT1-206ENST00000564557 SEC16BQ96JE7 1060 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 AGAP4Q96P64 663 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 ATOH8Q96SQ7 321 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 NT5DC2Q9H857 520 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 ZNF160Q9HCG1 818 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 MLXIPLQ9NP71 852 aa12.93□□□□□ -0.34
CNOT1-206ENST00000564557 CPSF2Q9P2I0 782 aaKnown RBP12.93□□□□□ -0.34
CNOT1-206ENST00000564557 TNPO3Q9Y5L0 923 aaKnown RBP12.93□□□□□ -0.34
CNOT1-206ENST00000564557 HMX2A2RU54 273 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 TTLL8A6PVC2 850 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 MASP2O00187 686 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 RIPK2O43353 540 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 GALR3O60755 368 aaPredicted RBP12.92□□□□□ -0.34
CNOT1-206ENST00000564557 SMIM24O75264 130 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 ALDOAP04075 364 aaKnown RBP12.92□□□□□ -0.34
CNOT1-206ENST00000564557 PDGFAP04085 211 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 CYC1P08574 325 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 COL6A2P12110 1019 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 ICAM2P13598 275 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 JAK1P23458 1154 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 ARL1P40616 181 aaPredicted RBP12.92□□□□□ -0.34
CNOT1-206ENST00000564557 SOX8P57073 446 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 TLE1Q04724 770 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 ACTN3Q08043 901 aaPredicted RBP12.92□□□□□ -0.34
CNOT1-206ENST00000564557 DOC2AQ14183 400 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 PFKFB4Q16877 469 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 MYLK4Q86YV6 388 aaPredicted RBP12.92□□□□□ -0.34
CNOT1-206ENST00000564557 KBTBD2Q8IY47 623 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.92□□□□□ -0.34
CNOT1-206ENST00000564557 CNPY4Q8N129 248 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 ZADH2Q8N4Q0 377 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 TEX9Q8N6V9 391 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 UTP15Q8TED0 518 aaKnown RBP12.92□□□□□ -0.34
CNOT1-206ENST00000564557 MTBPQ96DY7 904 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 OR1F2PQ96R84 312 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 SMAD5Q99717 465 aaKnown RBP12.92□□□□□ -0.34
CNOT1-206ENST00000564557 TRIM4Q9C037 500 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 LHPPQ9H008 270 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 L2HGDHQ9H9P8 463 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 CLK4Q9HAZ1 481 aaKnown RBP12.92□□□□□ -0.34
CNOT1-206ENST00000564557 SLAMF7Q9NQ25 335 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 RIC8BQ9NVN3 520 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 TMCO1Q9UM00 188 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 SPTA1P02549 2419 aa12.92□□□□□ -0.34
CNOT1-206ENST00000564557 IQANK1A0A1B0GTG1 560 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 CHST10O43529 356 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 JRKO75564 520 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 CLEC3AO75596 197 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 WFS1O76024 890 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 PCNAP12004 261 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 PIK3CGP48736 1102 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 AGTR2P50052 363 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 ALDH18A1P54886 795 aaKnown RBP12.91□□□□□ -0.34
CNOT1-206ENST00000564557 OLR1P78380 273 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 BTN3A2P78410 334 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 SLC29A2Q14542 456 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 COLEC12Q5KU26 742 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 TRIM40Q6P9F5 258 aa12.91□□□□□ -0.34
CNOT1-206ENST00000564557 PDSS2Q86YH6 399 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms