RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 PTX3P26022 381 aaPredicted RBP25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 PLA2G16P53816 162 aa25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 AQP5P55064 265 aa25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 ADPRMQ3LIE5 342 aa25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 C10orf62Q5T681 223 aaPredicted RBP25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 DEPDC1Q5TB30 811 aa25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 TMEM214Q6NUQ4 689 aaKnown RBP25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 RNF165Q6ZSG1 346 aa25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 GPR135Q8IZ08 494 aa25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 KIRREL3Q8IZU9 778 aa25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 UTP15Q8TED0 518 aaKnown RBP25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 APIPQ96GX9 242 aa25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 C17orf62Q9BQA9 187 aa25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 EBF4Q9BQW3 602 aa25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 MEAF6Q9HAF1 191 aa25.69■■□□□ 1.7
SH3GL3-205ENST00000563901 SERTM1A2A2V5 107 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 HYKKA2RU49 373 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 SLCO1B7G3V0H7 640 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 SLC28A1O00337 649 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 PLD2O14939 933 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 POLR1CO15160 346 aaPredicted RBP25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 ERI3O43414 337 aaKnown RBP25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 SHOX2O60902 331 aaPredicted RBP25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 JMJD7P0C870 316 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 ATXN8OSP0DMR3 200 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 EPHA3P29320 983 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 NR6A1Q15406 480 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 SPDYAQ5MJ70 313 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 TMPRSS7Q7RTY8 843 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 METTL27Q8N6F8 245 aaPredicted RBP25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 GBP7Q8N8V2 638 aaPredicted RBP25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 SERPINI1Q99574 410 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 NLNQ9BYT8 704 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 VPS29Q9UBQ0 182 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 KNTC1P50748 2209 aa25.68■■□□□ 1.7
SH3GL3-205ENST00000563901 FITM1A5D6W6 292 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 B4E171 279 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 PLPP1O14494 284 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 ZNF749O43361 778 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 DIAPH2O60879 1101 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 FGF5P12034 268 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 HSD3B1P14060 373 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 ALOX15P16050 662 aaPredicted RBP25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 HSD3B2P26439 372 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 TSPAN7P41732 249 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 HK2P52789 917 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 ZNF33BQ06732 778 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 GRM7Q14831 915 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 GALNTL6Q49A17 601 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 CHSY3Q70JA7 882 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 PPP1R3BQ86XI6 285 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 TUBGCP3Q96CW5 907 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 TRIM55Q9BYV6 548 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 KCNK13Q9HB14 408 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 LHX9Q9NQ69 397 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 FBXO8Q9NRD0 319 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 DHCR7Q9UBM7 475 aaKnown RBP25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 PPT2Q9UMR5 302 aa25.67■■□□□ 1.7
SH3GL3-205ENST00000563901 LSM1O15116 133 aaKnown RBP25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 RGS14O43566 566 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 PEX11AO75192 247 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 IL1RNP18510 177 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 STXBP1P61764 594 aaKnown RBP25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 TBL3Q12788 808 aaKnown RBP25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 CUL3Q13618 768 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 EPGNQ6UW88 154 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 TMEM126BQ8IUX1 230 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 SHISA5Q8N114 240 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 CACTIN-AS1Q8N1I8 211 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 GALNT15Q8N3T1 639 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 AMER3Q8N944 861 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 TTC29Q8NA56 475 aaPredicted RBP25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 OR2L5Q8NG80 312 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 WDR36Q8NI36 951 aaKnown RBP25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 OR52B2Q96RD2 323 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 AKTIPQ9H8T0 292 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 B3GALT1Q9Y5Z6 326 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 A0A0G2JND7 137 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 TRPC5OSA6NMA1 111 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 SCRG1O75711 98 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 TGDSO95455 350 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 GBAP04062 536 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 GCGRP47871 477 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 IDH3AP50213 366 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 RAP1GDS1P52306 607 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 IL11RAQ14626 422 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 PUM1Q14671 1186 aaKnown RBP eCLIP25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 DEFB134Q4QY38 66 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 PDSS2Q86YH6 399 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 C1orf52Q8N6N3 182 aaKnown RBP25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 GAL3ST3Q96A11 431 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 TEFMQ96QE5 360 aaKnown RBP25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 ZNF717Q9BY31 904 aaPredicted RBP25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 CUTCQ9NTM9 273 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 PSD3Q9NYI0 1048 aa25.66■■□□□ 1.7
SH3GL3-205ENST00000563901 ZNF860A6NHJ4 632 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 TXNDC9O14530 226 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 NTRK1P04629 796 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 TROVE2P10155 538 aaKnown RBP eCLIP25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 ZNF28P17035 718 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms