RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 TMEM198Q66K66 360 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 IKBIPQ70UQ0 350 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 AMIGO1Q86WK6 493 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 SVOPLQ8N434 492 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 ZCCHC10Q8TBK6 192 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 ARRDC3Q96B67 414 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 BRINP2Q9C0B6 783 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 MTG2Q9H4K7 406 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 ARMC1Q9NVT9 282 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 POMPQ9Y244 141 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 PTPRFP10586 1907 aa7.29□□□□□ -1.24
TCF4-216ENST00000562680 TRIP12Q14669 1992 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 TMEM233B4DJY2 109 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 AURKAO14965 403 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 NDUFS4O43181 175 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 IGHA2P01877 340 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 CCNYL3P0C7X3 344 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 CCT3P49368 545 aaKnown RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 AGTR2P50052 363 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 CRISP3P54108 245 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 GRIN2CQ14957 1233 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 DEPDC1Q5TB30 811 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 FAM217AQ8IXS0 508 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 OR52L1Q8NGH7 329 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 NR4A3Q92570 626 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 CENPNQ96H22 339 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 CAMK1GQ96NX5 476 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 ATOH8Q96SQ7 321 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 HHATLQ9HCP6 504 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 STOX2Q9P2F5 926 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 A0A0J9YVX5 310 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 NOS1APO75052 506 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 ZNF8P17098 575 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 GCAP28676 217 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 CD6P30203 668 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 NUP62P37198 522 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 PGFP49763 221 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 GDI2P50395 445 aaKnown RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 RPS13P62277 151 aaKnown RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 BCL7AQ4VC05 210 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 ZNF789Q5FWF6 425 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 TOR1AIP1Q5JTV8 583 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 CLVS2Q5SYC1 327 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 SPESP1Q6UW49 350 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 XAGE5Q8WWM1 108 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 LRCH3Q96II8 777 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 ZNF347Q96SE7 839 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 NTMT1Q9BV86 223 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 ZNF717Q9BY31 904 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 REEP4Q9H6H4 257 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 BRF2Q9HAW0 419 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 HRASLS2Q9NWW9 162 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 EGFL7Q9UHF1 273 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 GOLGA4Q13439 2230 aaKnown RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 FAM221BA6H8Z2 402 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 FAM170BA6NMN3 283 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 CXCR6O00574 342 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 MATN4O95460 622 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 F7P08709 466 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 DRD2P14416 443 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 PRKAR1BP31321 381 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 P2RY2P41231 377 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 MAGEA12P43365 314 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 ZNF155Q12901 538 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 DOC2AQ14183 400 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 KIR2DS3Q14952 304 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 ZNF630Q2M218 657 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 UAP1L1Q3KQV9 507 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 IFI44LQ53G44 452 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 FAM129CQ86XR2 697 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 UBTD2Q8WUN7 234 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 VN1R3Q9BXE9 311 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 ZCCHC3Q9NUD5 404 aaKnown RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 ERVK-11Q9UQG0 969 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 ARID2Q68CP9 1835 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 DUX1O43812 170 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 SYPP08247 313 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 AGXTP21549 392 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 NOXRED1Q6NXP6 359 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 ASPGQ86U10 573 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 PARGQ86W56 976 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 PLD3Q8IV08 490 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 FAM20CQ8IXL6 584 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 OR8J3Q8NGG0 315 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 WFDC5Q8TCV5 224 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 UTP15Q8TED0 518 aaKnown RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 CLPTM1LQ96KA5 538 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 DENND2DQ9H6A0 471 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 CCNB1IP1Q9NPC3 277 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 HPS4Q9NQG7 708 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 OR6C2Q9NZP2 312 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 COPS7AQ9UBW8 275 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 SERTAD3Q9UJW9 196 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 C9J4A7 227 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 H3BN98 237 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 TRMUO75648 421 aaKnown RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 SLC7A1P30825 629 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 KCNC1P48547 511 aa7.28□□□□□ -1.24
TCF4-216ENST00000562680 VASPP50552 380 aaPredicted RBP7.28□□□□□ -1.24
TCF4-216ENST00000562680 CHN2P52757 468 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms