RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 PSMF1Q92530 271 aa8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 NXNL1Q96CM4 212 aa8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 CYTH2Q99418 400 aa8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 WDR77Q9BQA1 342 aaPredicted RBP8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 DERL2Q9GZP9 239 aa8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 EPS8L2Q9H6S3 715 aa8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 PELI2Q9HAT8 420 aa8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 ZDHHC18Q9NUE0 388 aa8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 ZFP69BQ9UJL9 534 aa8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 RNF112Q9ULX5 631 aa8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 COPG1Q9Y678 874 aaKnown RBP8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 KCNE2Q9Y6J6 123 aa8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 SETXQ7Z333 2677 aaKnown RBP8.94□□□□□ -0.98
NSMCE1-203ENST00000562039 BLACEA4D250 179 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 LRRC14BA6NHZ5 514 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 MAN1A2O60476 641 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 GALR3O60755 368 aaPredicted RBP8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 H2AFYO75367 372 aaKnown RBP8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 IPO13O94829 963 aaKnown RBP8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 ACSL3O95573 720 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 S100BP04271 92 aaPredicted RBP8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 SERPINA7P05543 415 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 GSTA2P09210 222 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 SLC35E2BP0CK96 405 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 RNF224P0DH78 156 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 C1GALT1C1LP0DN25 315 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 ALOX12P18054 663 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 MAOAP21397 527 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 SLC6A12P48065 614 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 SOX8P57073 446 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 BTN3A2P78410 334 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 ZNF33BQ06732 778 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 ACTN3Q08043 901 aaPredicted RBP8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 CDC16Q13042 620 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 MFAP5Q13361 173 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 ABRAXAS2Q15018 415 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 ZKSCAN8Q15776 578 aaPredicted RBP8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 WHAMMP3Q1A5X7 153 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 SFT2D3Q587I9 215 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 XKR6Q5GH73 641 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 TMEM205Q6UW68 189 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 SLCO4C1Q6ZQN7 724 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 Q6ZS92 163 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 CPEB2Q7Z5Q1 589 aaKnown RBP8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 RNF175Q8N4F7 328 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 NT5CQ8TCD5 201 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 CREB3L4Q8TEY5 395 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 TM9SF4Q92544 642 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 VPS50Q96JG6 964 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 TGIF2Q9GZN2 237 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.93□□□□□ -0.981e-6■■■■□ 23.5
NSMCE1-203ENST00000562039 ZNF700Q9H0M5 742 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 KCNK13Q9HB14 408 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 POPDC3Q9HBV1 291 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 LANCL2Q9NS86 450 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 IGSF5Q9NSI5 407 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 DNAJC11Q9NVH1 559 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 RIC8BQ9NVN3 520 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 ANKRD10Q9NXR5 420 aa8.93□□□□□ -0.98
NSMCE1-203ENST00000562039 LOC102723996A0A087X1L8 192 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 A1L4Q6 167 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 POC1B-GALNT4F8VUJ3 575 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 SEMA7AO75326 666 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 STK16O75716 305 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 AGFG2O95081 481 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 FHP07954 510 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 CTAGE8P0CG41 777 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 PCNAP12004 261 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 GNAZP19086 355 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 CD22P20273 847 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 HNRNPH1P31943 449 aaKnown RBP8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 HNMTP50135 292 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 PLA2G16P53816 162 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 OR4D2P58180 307 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 ATP6V0D1P61421 351 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 CDKL1Q00532 357 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 RHAGQ02094 409 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 CBLBQ13191 982 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 PWP1Q13610 501 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 DDX39BQ13838 428 aaKnown RBP8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 RUNX2Q13950 521 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 DOC2AQ14183 400 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 ZNF169Q14929 603 aaPredicted RBP8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 HERC3Q15034 1050 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 NSDHLQ15738 373 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 FAM219BQ5XKK7 198 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 PAPD4Q6PIY7 484 aaKnown RBP8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 IGFL3Q6UXB1 125 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 TMIGD1Q6UXZ0 262 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 ABHD13Q7L211 337 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 VN1R5Q7Z5H4 357 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 TBC1D1Q86TI0 1168 aaPredicted RBP8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 MYLK4Q86YV6 388 aaPredicted RBP8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 CTAGE4Q8IX94 777 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 KIF2BQ8N4N8 673 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 AFAP1L2Q8N4X5 818 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 FAM47BQ8NA70 645 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 GALNT11Q8NCW6 608 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 NACC2Q96BF6 587 aa8.92□□□□□ -0.98
NSMCE1-203ENST00000562039 TBC1D20Q96BZ9 403 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms