RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 SHMT2P34897 504 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 PCGF2P35227 344 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 HBA1P69905 142 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 REEP5Q00765 189 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 PPP1R8Q12972 351 aaKnown RBP9.4□□□□□ -0.9
SMG1-205ENST00000561947 SGCGQ13326 291 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 MPEG1Q2M385 716 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMG1-205ENST00000561947 ANKRD34AQ69YU3 496 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 KIAA1161Q6NSJ0 714 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 SHQ1Q6PI26 577 aaKnown RBP9.4□□□□□ -0.9
SMG1-205ENST00000561947 CHST15Q7LFX5 561 aaPredicted RBP9.4□□□□□ -0.9
SMG1-205ENST00000561947 ABHD11Q8NFV4 315 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 ADAMTS16Q8TE57 1224 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 CIDECQ96AQ7 238 aaPredicted RBP9.4□□□□□ -0.9
SMG1-205ENST00000561947 FAM131CQ96AQ9 280 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 HSH2DQ96JZ2 352 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 TIMM29Q9BSF4 260 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 S1PR5Q9H228 398 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 TM9SF3Q9HD45 589 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 CUEDC1Q9NWM3 386 aaPredicted RBP9.4□□□□□ -0.9
SMG1-205ENST00000561947 FAM118AQ9NWS6 357 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 FBXL12Q9NXK8 326 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 VNN3Q9NY84 501 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 AHSPQ9NZD4 102 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 PTTG2Q9NZH5 202 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 CLEC1BQ9P126 229 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 ABCG2Q9UNQ0 655 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 WDR37Q9Y2I8 494 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 AP1M2Q9Y6Q5 423 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 PLXND1Q9Y4D7 1925 aa9.4□□□□□ -0.9
SMG1-205ENST00000561947 MYO9BQ13459 2157 aa9.4□□□□□ -0.91
SMG1-205ENST00000561947 A0A1W2PQU0 124 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 PRR23AA6NEV1 266 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 ANKDD1BA6NHY2 528 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 HS6ST1O60243 411 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 SEMA3DO95025 777 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 TBX6O95947 436 aaPredicted RBP9.39□□□□□ -0.91
SMG1-205ENST00000561947 FUCA1P04066 466 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 NTRK1P04629 796 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 FABP3P05413 133 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 IL3P08700 152 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 PSMB5P28074 263 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 TPP2P29144 1249 aaPredicted RBP9.39□□□□□ -0.91
SMG1-205ENST00000561947 CCR8P51685 355 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 TMEM259Q4ZIN3 620 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 OR2T5Q6IEZ7 315 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 TMEM26Q6ZUK4 368 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 LPCAT2Q7L5N7 544 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 VTCN1Q7Z7D3 282 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 ZNF555Q8NEP9 628 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 OR2T29Q8NH02 315 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 TMIGD2Q96BF3 282 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 FERD3LQ96RJ6 166 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 INSM2Q96T92 566 aaPredicted RBP9.39□□□□□ -0.91
SMG1-205ENST00000561947 SLC35A5Q9BS91 424 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 SORBS1Q9BX66 1292 aaKnown RBP9.39□□□□□ -0.91
SMG1-205ENST00000561947 MS4A8Q9BY19 250 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 MKRN2Q9H000 416 aaKnown RBP9.39□□□□□ -0.91
SMG1-205ENST00000561947 GABARAPL1Q9H0R8 117 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 OSGEPL1Q9H4B0 414 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 SPASTQ9UBP0 616 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 H3BSA7 217 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 RNGTTO60942 597 aaKnown RBP9.39□□□□□ -0.91
SMG1-205ENST00000561947 SERPINB1P30740 379 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 NTSR1P30989 418 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 IGFALSP35858 605 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 MVDP53602 400 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 SH3BGRP55822 239 aaPredicted RBP9.39□□□□□ -0.91
SMG1-205ENST00000561947 KCNAB2Q13303 367 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 ADAM15Q13444 863 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 TMEM196Q5HYL7 178 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 KHDRBS2Q5VWX1 349 aaKnown RBP9.39□□□□□ -0.91
SMG1-205ENST00000561947 B3GNT6Q6ZMB0 384 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 ZNF852Q6ZMS4 543 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 THAP5Q7Z6K1 395 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 C8orf59Q8N0T1 100 aaPredicted RBP9.39□□□□□ -0.91
SMG1-205ENST00000561947 NAGSQ8N159 534 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 RAB42Q8N4Z0 105 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 ARL10Q8N8L6 244 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 ANKRD53Q8N9V6 530 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 C11orf65Q8NCR3 313 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 OR14C36Q8NHC7 312 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 C12orf66Q96MD2 445 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 GABRG3Q99928 467 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 SLC17A9Q9BYT1 436 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 ASPSCR1Q9BZE9 553 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 AMBRA1Q9C0C7 1298 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 NT5DC2Q9H857 520 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 RMI1Q9H9A7 625 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 VCX3AQ9NNX9 186 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 C3orf18Q9UK00 162 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 FAF1Q9UNN5 650 aaPredicted RBP9.39□□□□□ -0.91
SMG1-205ENST00000561947 SLC17A4Q9Y2C5 497 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 U3KQV3 271 aa9.39□□□□□ -0.91
SMG1-205ENST00000561947 REV3LO60673 3130 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 hCG_2039718K7EN88 272 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 PLPP1O14494 284 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 DNTTP04053 509 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 CEACAM5P06731 702 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms