RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 GLYR1Q49A26 553 aaPredicted RBP15.88■□□□□ 0.13
TPM1-228ENST00000560975 TJAP1Q5JTD0 557 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 SERPINA9Q86WD7 417 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 PLCZ1Q86YW0 608 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 SYNPOQ8N3V7 929 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 DOHHQ9BU89 302 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 C11orf16Q9NQ32 467 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 CLN6Q9NWW5 311 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 RHCGQ9UBD6 479 aa15.88■□□□□ 0.13
TPM1-228ENST00000560975 DRGXA6NNA5 263 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 TMEM229AB2RXF0 380 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 B8ZZF3 427 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 PLD2O14939 933 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 ADAMDEC1O15204 470 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 ANXA8P13928 327 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 CNR2P34972 360 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 FEN1P39748 380 aaKnown RBP15.87■□□□□ 0.13
TPM1-228ENST00000560975 RAB25P57735 213 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 BNC1Q01954 994 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 TOR1AIP1Q5JTV8 583 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 DGKKQ5KSL6 1271 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 PXDC1Q5TGL8 231 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 LIPKQ5VXJ0 399 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 NOXRED1Q6NXP6 359 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 TMC8Q8IU68 726 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 HOMEZQ8IX15 550 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 TCTE3Q8IZS6 198 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 PSKH2Q96QS6 385 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 GPR63Q9BZJ6 419 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 SLC23A1Q9UHI7 598 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 PATJQ8NI35 1801 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 CBX4O00257 560 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 LAMP1P11279 417 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 EPORP19235 508 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 RPL9P32969 192 aaKnown RBP15.87■□□□□ 0.13
TPM1-228ENST00000560975 CRYBB2P43320 205 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 WNT3P56703 355 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 MICAQ29983 383 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.87■□□□□ 0.139e-6■■■■□ 24.9
TPM1-228ENST00000560975 ESCO2Q56NI9 601 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 TOR2AQ5JU69 321 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 PAQR6Q6TCH4 344 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 ZNF598Q86UK7 904 aaKnown RBP15.87■□□□□ 0.13
TPM1-228ENST00000560975 LSMEM1Q8N8F7 131 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 TTC9Q92623 222 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 FAM129BQ96TA1 746 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 DNAJC27Q9NZQ0 273 aa15.87■□□□□ 0.13
TPM1-228ENST00000560975 FAM227AF5H4B4 570 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 ENTPD6O75354 484 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 CSO75390 466 aaKnown RBP15.86■□□□□ 0.13
TPM1-228ENST00000560975 SCG5P05408 212 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 SRCP12931 536 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 ALAS2P22557 587 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 DGKAP23743 735 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 MAN2A2P49641 1150 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 BEX3Q00994 111 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 LAMTOR1Q6IAA8 161 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 CD300LGQ6UXG3 332 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 GRAMD2AQ8IUY3 354 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 GPR65Q8IYL9 337 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 NAGSQ8N159 534 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 STK40Q8N2I9 435 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 OR9Q1Q8NGQ5 310 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 NDRG2Q9UN36 371 aaKnown RBP15.86■□□□□ 0.13
TPM1-228ENST00000560975 PADI2Q9Y2J8 665 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 PPP2R3BQ9Y5P8 575 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 PCDH7O60245 1069 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 ALPIP09923 528 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 TACR2P21452 398 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 PSEN2P49810 448 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 CACNG1Q06432 222 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.86■□□□□ 0.13
TPM1-228ENST00000560975 DDX39BQ13838 428 aaKnown RBP15.86■□□□□ 0.13
TPM1-228ENST00000560975 XKRXQ6PP77 449 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 LINGO4Q6UY18 593 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 BCDIN3DQ7Z5W3 292 aaKnown RBP15.86■□□□□ 0.13
TPM1-228ENST00000560975 TTC9BQ8N6N2 239 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 ATP6V1C2Q8NEY4 427 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 OR8H1Q8NGG4 311 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 EID2BQ96D98 161 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 CRISPLD1Q9H336 500 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 TRIM45Q9H8W5 580 aaPredicted RBP15.86■□□□□ 0.13
TPM1-228ENST00000560975 MCUBQ9NWR8 336 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 ARL15Q9NXU5 204 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 NLKQ9UBE8 527 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 SCML2Q9UQR0 700 aa15.86■□□□□ 0.13
TPM1-228ENST00000560975 ZNF670-ZNF695F2Z2N8 137 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 CXCL11O14625 94 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 SCN2BO60939 215 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 GCM2O75603 506 aaPredicted RBP15.85■□□□□ 0.13
TPM1-228ENST00000560975 APEX1P27695 318 aaKnown RBP15.85■□□□□ 0.13
TPM1-228ENST00000560975 MAPK12P53778 367 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 ALDH6A1Q02252 535 aaKnown RBP15.85■□□□□ 0.13
TPM1-228ENST00000560975 SPHARQ15513 63 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 CHCHD4Q8N4Q1 142 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 SKA2Q8WVK7 121 aaPredicted RBP15.85■□□□□ 0.13
TPM1-228ENST00000560975 WDFY2Q96P53 400 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 TCF25Q9BQ70 676 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 SLC29A3Q9BZD2 475 aa15.85■□□□□ 0.13
TPM1-228ENST00000560975 POLR2J2Q9GZM3 115 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms